Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02918 ATGGCTCTCGCTTTCTTCGCCCTCGCCATTTTCCTCTTCCTCACTCTCGATCCCGATGTTTCTCATTCTTCCACCGCTTCCGCGGCTTCCTCCGAAGGCGTCGAGGTGCAGATTACTTATGGTTCGGTTATAAAGCTTATGCACGAGAAAACGAAATTTAGGTTGCATTCTCACGATGTACCGTACGGTTCTGGAAGTGGACAACAATCAGTTACCGGTTTTCCCACTGTTGATGATTCCAACAGTTATTGGATTGTTAGGCCCGAACCTGGAACTTCTGCTAAACAAGGTGACGCCATTAAGAGTGGCACAATCATTAGATTACAGCACATGAGGACAAGAAAGTGGCTACACAGCCATCTGCATGCTTCTCCTATATCAGGCAATCTTGAGGTCAGCTGCTTTGGTGGAGAATCTGAATCTGACACCGGGGACTATTGGAGGCTTTTAATAGAAGGAAGTGGGAAGACTTGGAAGCAGGATCAGAGGGTTCGGCTTCAGCATATTGACACTTCAGGCTATCTACATAGTCATGATAAGAAATACAGTCGGATTGCTGGGGGACAGCAGGAGGTTTGTGGTGTTCGCGAAAAGCGCCCTGACAATGTCTGGTTGGCAGCTGAAGGTGTCTACCTTCCCGTCACTGAAAGCAAGCAAGTTGAGTAG 666 0.479 MALAFFALAIFLFLTLDPDVSHSSTASAASSEGVEVQITYGSVIKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPTVDDSNSYWIVRPEPGTSAKQGDAIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEVSCFGGESESDTGDYWRLLIEGSGKTWKQDQRVRLQHIDTSGYLHSHDKKYSRIAGGQQEVCGVREKRPDNVWLAAEGVYLPVTESKQVE 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02918 221 SMART mir_2 35 89 IPR016093 -
Car05g02918 221 SMART mir_2 155 209 IPR016093 -
Car05g02918 221 SMART mir_2 97 152 IPR016093 -
Car05g02918 221 Gene3D - 22 219 - -
Car05g02918 221 ProSiteProfiles MIR domain profile. 97 152 IPR016093 -
Car05g02918 221 Pfam MIR domain 56 202 IPR016093 -
Car05g02918 221 ProSiteProfiles MIR domain profile. 35 89 IPR016093 -
Car05g02918 221 PANTHER STROMAL CELL-DERIVED FACTOR 2-LIKE PROTEIN 1 218 - -
Car05g02918 221 SUPERFAMILY MIR domain 36 209 IPR036300 -
Car05g02918 221 PANTHER MIR MOTIF, GLYCOSYLTRANSFERASE 39-LIKE PROTEIN-RELATED 1 218 - -
Car05g02918 221 ProSiteProfiles MIR domain profile. 155 209 IPR016093 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02918 - - gsj:114414928 408.297