Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02907 ATGCGTGAACCACAAATGTGTAATATTTTGTGTAAAATTAAACTTGATGCTAAAACTGCCAAGGAGTTCAAAGAGAAGATCAATGACGAGTATCGGGTGAACATGATCCTAGATAACCTTCCTCTAGTTGTTCCCATAAAACGGAATGATCAGGATTCTACCATTTATCAGCTTGGTTTCCATGTTGGCCTCAAAGGGCAGTATACCGGGAGCAAGGAAGAAAAGTATTTTATCCACAATCATTTGGCATTTACTGTCAAGTATCATAGAGATGTGCAAACTGAATCTGCTAGAATTGTGGGCTTTGAGGTTAAGCCGTTCAGTGTTAAACATGAGTACGAAGGTAAATGGGATGAGAAAAAGACCCGTTTGACAACCTGTGACCCTCATGCTAAGCACACAGTTGTGAACAACAACTCTCCTCAAGAAGTTGAAGAGAACAAGGAAATTATTTTCACATATGATGTTGAATTCAAGGAGAGTGATGTGAAGTGGGCTTCAAGATGGGATGCCTATTTGCTAATGAATGATGACCAAATTCACTGGTTTTCTATTGTTAACTCATTAATGATTGTTCTCTTCCTTTCGGGTATGGTGGCAATGATAATGCTGCGGACACTATACCGTGACATTGCAAAGTATAATGAGCTTGAGACCCAGGAAGAAGCCCAAGAAGAGACTGGTTGGAAGCTTGTCCATGGGGATGTATTTAGGCCTCCCAACAACTCAGATTTGCTTTGTGTTTATGTTGGAACTGGTGTTCAGTTTTTTGGGATGATTCTAGTAACCATGATATTTGCCATCCTTGGGTTTCTTTCTCCTTCAAACCGGGGTGGGCTCATGACAGCCATGCTCTTAGTTTGGGTTTTCATGGGAATATTTGCTGGTTATTCTTCAACTCGCTTGTACAAAATGTTCAAAGGATCAGAGTGGAAAAAAATTGCCCTCAGGACTGCAACCTTGTTCCCTGCAACTGTCTCTGTCATTTTCTTTATATTAAATGCTCTTATATGGGGCCAAAAATCATCTGGAGCTGTGCCATTTGGTACAATGTTTGCTCTGATCTTTTTATGGTTTGGGATCTCTGTTCCACTTGTTTTTGTGGGTAGCTACATCGGTTTCAAAAAACCTGCAATTGAGAATCCGGTGAAGACAAACAAAATCCCAAGGCAGATCCCTGAGCAGGCCTGGTACATGAACCCAGCTTTCTCAGTTCTGATTGGAGGAATACTTCCTTTTGGAGCTGTTTTCATTGAGCTCTTCTTCATCCTCACCTCAATCTGGTTGAATCAGTTTTACTACATCTTCGGGTTCCTCTTTTTGGTCTTCATCATCCTCGTTGTCACTTGTGCTGAAATCACCATTGTGCTCTGCTACTTCCAGTTATGCAGTGAGGATTACTTGTGGTGGTGGCGGTCATACCTTACTTCTGGTTCTTCTGCACTATACCTCTTTCTTTATGCAACATTCTACTTCTTTACCAAGCTAGAAATCACAAAGTTGGTGTCTGCAATATTTTACTTTGGATACATGCTTATAGCTTCTTATGCGTTTTTTGTGGTAACTGGTACTATTGGATTCTATGCATGCTTTTGGTTCACAAGGCTCATCTACTCCTCAGTCAAAATTGATTAG 1635 0.4073 MREPQMCNILCKIKLDAKTAKEFKEKINDEYRVNMILDNLPLVVPIKRNDQDSTIYQLGFHVGLKGQYTGSKEEKYFIHNHLAFTVKYHRDVQTESARIVGFEVKPFSVKHEYEGKWDEKKTRLTTCDPHAKHTVVNNNSPQEVEENKEIIFTYDVEFKESDVKWASRWDAYLLMNDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDIAKYNELETQEEAQEETGWKLVHGDVFRPPNNSDLLCVYVGTGVQFFGMILVTMIFAILGFLSPSNRGGLMTAMLLVWVFMGIFAGYSSTRLYKMFKGSEWKKIALRTATLFPATVSVIFFILNALIWGQKSSGAVPFGTMFALIFLWFGISVPLVFVGSYIGFKKPAIENPVKTNKIPRQIPEQAWYMNPAFSVLIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVFIILVVTCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSALYLFLYATFYFFTKLEITKLVSAIFYFGYMLIASYAFFVVTGTIGFYACFWFTRLIYSSVKID 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02907 544 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 1 544 - -
Car05g02907 544 Pfam Endomembrane protein 70 1 500 IPR004240 GO:0016021
Car05g02907 544 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 1 544 IPR004240 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02907 Car-Chr5 74021369 74025825 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02907 1 544 Miscellaneous Gene Families AT5G10840 86.081 0.0 965
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02907 K17086 - gmx:100780976 1033.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02907 05 74021369 74025825 Car05g02907 05 74021369 74025825 ECH