Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02901 ATGGCGTTGGTGAATCCATTTCTTCTCCACACAAAAACTCGTCTTGCTTTACATGTTTCAGCTCCACCATCCAAACAAGTACTACACCTTTGGACTAACCCATATTGCAATTTCAATTTCAACAAAGTTTTGTCATCATCAAGAAGAAGGAAGGAATCATGGTGTGTGGCTGCAGCAGATATCAAAGCTTCAACTTTACTTGATGCGGAAGAAGATCAGAGAATTCTAGTGGGACCTTCCAGTGATCAAGAACGAAGGGGTGAGAGAGTGGTTGCGGATTATGATTGGACAGAGGAATGGTACCCTTTGTACCTTACTAGGAATGTACCGCATGATGCACCATTGGGTCTCAAAGTGTTTGATAAGAACCTTGTTTTGTTTAGAGATGGTAAAGGTCAGTTTCAATGCTATGAAGATCGATGCCCCCACAGGTTAGCAAAACTATCTGAAGGCCAGTTGATTGATGGAAGGCTTGAATGCCTATATCATGGATGGCAATTCGAAGGCGAGGGAAAATGTGTGAAGATACCTCAGCTTCCAGCTGATGCCAAAATTCCTAGGTCAGCCTGTGTTAAAACATATGAGGTGAGGGACTCCCAAGGTGTTATTTGGGTATGGATGTCTCCAAAGACACCTCCAAATGTCAGTAAAATACCTTGGTTTGAGAACTTTGCAAGGCCAGGGTTTCAAGATGTTTCAACAACTCACGAACTCCCATATGATCATTCTATTCTACTGGAAAATTTGATGGACCCTGCTCATATTCCAATCTCGCACGATAGAACAGATTGGACGGCAAAAAGAGAAGATGCACAGCCACTATGTTTTGAGGTGACTGAACGAACTGATAGAGGGTTTGCAGGTTGGTGGGGACGAGAGAAAGACGGGTCTATGCCTAACTTTTTACGATTCGAGGCTCCTTGTGTTCTACAAAATAACAGGGAAATTGTTGATAAAAATGGCGAAATAAACTACTTCAGTGGTTTGTTCCTTTGTAGACCAACTGGACAAGGGAAATCCATGCTGATAGTGAGGTTTGGAGGAACAAAAAGATCTCCATTAGTGAAACTGTTTCCTCAATGGTACTTCCATCAGAATGCAAGCAAGGTGTTTGAACAAGACATGGGATTCTTATCTTCCCAAAATGAAATTCTATTGAAAGAGAAGGTTCCAACAAAGGAACTATACCTGAATTTAAAATCTTCAGACACATGGGTTGCTGAATACCGGAAGTGGATGGATAAAGTGGGACACGGGATGCCGTATCATTTTGGTCACAGCACTATTTCCTTGCCGAAAGAGCCTGCTGTGATTGAACATGCACCTGCTGGACTCATTGCAGGACTATCAGCTTCCTCACCTGCAAAAGGAGGCATTGGAACAATGCATGCCCCAAATTTAGCAAATAGATATTTTAGACATGTAATACACTGTAAAGGATGTAGAACTGCCGTCAAAGCTTTTCAAACTTGGAAAAATGCTCTTTCAGCTGTGGTTGTTGCATTAGCTGCATTGGCAATTCTGGTATCTGGGAGACAATGGAAAGCCATTTTGTTGGCATCTGCATCACTGTGCTCTGTTGGAGTATATGCTTGTTCAACAGCTATTGCAATGAATACAACAAACTTTATTAGGATACATAGGAGATTGTGA 1653 0.4192 MALVNPFLLHTKTRLALHVSAPPSKQVLHLWTNPYCNFNFNKVLSSSRRRKESWCVAAADIKASTLLDAEEDQRILVGPSSDQERRGERVVADYDWTEEWYPLYLTRNVPHDAPLGLKVFDKNLVLFRDGKGQFQCYEDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVKTYEVRDSQGVIWVWMSPKTPPNVSKIPWFENFARPGFQDVSTTHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLCFEVTERTDRGFAGWWGREKDGSMPNFLRFEAPCVLQNNREIVDKNGEINYFSGLFLCRPTGQGKSMLIVRFGGTKRSPLVKLFPQWYFHQNASKVFEQDMGFLSSQNEILLKEKVPTKELYLNLKSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKEPAVIEHAPAGLIAGLSASSPAKGGIGTMHAPNLANRYFRHVIHCKGCRTAVKAFQTWKNALSAVVVALAALAILVSGRQWKAILLASASLCSVGVYACSTAIAMNTTNFIRIHRRL 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02901 550 PANTHER PROTEIN TIC 55, CHLOROPLASTIC 43 550 - -
Car05g02901 550 CDD Rieske_RO_Alpha_Tic55 83 216 - -
Car05g02901 550 Pfam Rieske [2Fe-2S] domain 99 181 IPR017941 GO:0051537
Car05g02901 550 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 43 550 - -
Car05g02901 550 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 100 205 IPR017941 GO:0051537
Car05g02901 550 Gene3D - 95 224 IPR036922 GO:0051537
Car05g02901 550 SUPERFAMILY Bet v1-like 200 419 - -
Car05g02901 550 SUPERFAMILY ISP domain 93 214 IPR036922 GO:0051537
Car05g02901 550 Pfam Pheophorbide a oxygenase 304 389 IPR013626 GO:0010277
Car05g02901 550 Gene3D - 227 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02901 Car-Chr5 73982124 73984993 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02901 - - gmx:100808233 964.526
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02901 05 73982124 73984993 Car05g02901 05 73982124 73984993 ECH