Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02900 ATGAAGATAGCAGTGGAAGGGTGCATGCATGGTGATCTAGACAATGTCTACAAAACCCTTCAACACCTCGAGAAATCTCAAAACACCAAAATCGACCTCCTTCTCTGTTGCGGCGATTTTCAGTCCGTAAGGAACAAGAATGATTTGAATAGCCTTAATGTGCCACAGCGTTATCGCACTATGAATTCGTTCTGGAAGTATTATTCTGGTTTGGAGCTTGCTCCTTATCCCACAATCTTCATCGGTGGTAACCACGAAGCTTCCAATTATCTTTGGGAACTATACTATGGAGGATGGGCTGCGCCTAATATATACTTTTTGGGAGCTGCTGGTGTGATCAAGTTTGGGAATATACGAATTGGTGGACTCTCTGGTATTTATAACCATCGTCATTATAAATCAGGACACTTTGAGAGGCCTCCGTATGACCAGAGTACCATTAGATCTGCTTATCATGTTCGCGAATATGATGTTCGCAAACTCATTCAAGTTGAGGAACCTATTGATATTTTTCTCTCACATGATTGGCCGGTGAGAATAACTGATCATGGGGATTGGGAGAGGCTTGCAAGGGAGAAGCCTTTCTTCAAGCAAGAGATAGAGGAAAAAAGACTTGGGAGTCCAGCTGCTGCTGAACTTCTAGAGAAATTGAAACCGCAATACTGGTTTTCAGCGCACTTACACTGCAAGTTTGCTGCTCTTGTTCAACATGGAGAAGGAGGTCCTGTGACAAAATTCCTAGCACTTGATAAATGTCTTCCTGGGCGCGACTTCTTACAGGTTGTTGAAATTGAATCGGAGGCAGGACCTTACGAGATTCAGTATGATGAAGAATGGTTGGCAATAACAAGAAGGTTCAACTTTGTATTCCCTTTGACAACCAAAGGTGCAGATTTTCGAGGGGTAAATCATGAGATGGAAGATTGTCGCCAATGGGTTAGAAGCAGGCTACAAGAGAGGGGTTGTAAACCTTTTGAATTTGTTAGAACAGTTTCATGTCATGATCCTTCTCAAGCCAATGTTGATGGTGCTTCAGCTGTGAATCCTCGGAATCCCCAGACAGAATATCTTTTGCGACTTCTAGAACTTCCATATCTTCTTGATAGAAATCCTGATTCAAAGGACATGTCGCCTTATCCTGCTCCTTTAATTCCAAGAGGCCATGCTGCTTACGATAGTGAGTACATTCCCATtgatgatgtggatgatgatgaggatgGGGGGATTCCAGAAGTTGATGGGGTGGAAAGTGGAAACTGA 1260 0.4222 MKIAVEGCMHGDLDNVYKTLQHLEKSQNTKIDLLLCCGDFQSVRNKNDLNSLNVPQRYRTMNSFWKYYSGLELAPYPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGAAGVIKFGNIRIGGLSGIYNHRHYKSGHFERPPYDQSTIRSAYHVREYDVRKLIQVEEPIDIFLSHDWPVRITDHGDWERLAREKPFFKQEIEEKRLGSPAAAELLEKLKPQYWFSAHLHCKFAALVQHGEGGPVTKFLALDKCLPGRDFLQVVEIESEAGPYEIQYDEEWLAITRRFNFVFPLTTKGADFRGVNHEMEDCRQWVRSRLQERGCKPFEFVRTVSCHDPSQANVDGASAVNPRNPQTEYLLRLLELPYLLDRNPDSKDMSPYPAPLIPRGHAAYDSEYIPIDDVDDDEDGGIPEVDGVESGN 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02900 419 MobiDBLite consensus disorder prediction 396 411 - -
Car05g02900 419 Pfam Calcineurin-like phosphoesterase 1 229 IPR004843 GO:0016787
Car05g02900 419 Gene3D - 8 244 IPR029052 -
Car05g02900 419 SMART DBR1_2 235 367 IPR007708 GO:0006397|GO:0016788
Car05g02900 419 CDD MPP_Dbr1_N 3 259 IPR041816 -
Car05g02900 419 Pfam Lariat debranching enzyme, C-terminal domain 243 364 IPR007708 GO:0006397|GO:0016788
Car05g02900 419 PANTHER RNA LARIAT DEBRANCHING ENZYME 1 380 - -
Car05g02900 419 MobiDBLite consensus disorder prediction 394 419 - -
Car05g02900 419 SUPERFAMILY Metallo-dependent phosphatases 1 253 IPR029052 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02900 K18328 - gmx:100812726 710.294