Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02884 ATGGCTAATCCAAATCATTACTCAATGGCTTCAAACAAAGCTCAGTCGTCTTCTTCAACTAATGTGTTTCGTTCCACTCCATCGTTGAGCACTCAACCGATGTCTCAAGTTGCATTGTTAGTCATGATAACAAATAATAATGTTAGTTCTCCGTTCGATTACTTCAAAGATCTAAACAAAGACAGAGAAGTTTGGAAGTTTGACATTCGTATTGTTGATGTGTGGTATGTTCTCGGTAAATATGGTCAATTGCATGTTGAAATGGCGTTTGTTGATGTTAAGGGTGATAGAATTCATGTTGCTGTTCCAAAAGATTATGTAGTTGGGTTCAAAGACACGTTGAAAGAGCACACAACATATATTATGCACAATTATTCTGTTGTTGATAATGATGACCAATTTAAGGTTTGTGATCATCGTTATAAGTTGATGTTTAATAGTGGGACTACTCTGACAGATGAGAAGTTGGTGATATTCTTAGTGGAAAATGTCAAAAGAGAAGGTGTTGGAAAGAAAGTTCAAGCTTCATTTAATAAGAAAGATCTTAGGAATACAATTGTGTCACGCTCGGTACTACTACGAGCTTTGTTGCATCAAAATATGGATGGTTCTATTACTCACGTGACAAATGCAACAGGAAAATTGACAAGGTTATTCCTTACGAGTTTGCAAACTTTGTCTGCAACATTGAGTTTCAAAATCTCATTCTTAAAGGACCTACCAGTGGGAAACGGCGTTATTATCTCCTTCAAGTGTGGCTGTGACAGATCTCAGAGAAGAGGTAAGCTAAGCTCCATAGTTATGGATAGTTTGCATCACACTCATTTCGACGAAAACGACGATTTCGAAGTTCCTCTTACTCAAACTCAAACACCAACTTCCAAACCCCTCGTAGACTTAAATAATCAACGCCCATCCAAGAAACCCAAAATCAAAACGACGCCGTTTAGTGGCAAGGAAAACATTCCCCCTTATTATCATTCTCACAACGACGGTTACGAAATCGATAACTGTAGCTTAGATTTCATTCCTTCAACTTTAGATTCTGATACCACCGTTCAAACCGTTTGTTCTTCTGTGTCAGAGCTGAAAAAGAAGAACACACGCACTTATTTTCACAATTCAATAGAGTCTAAATTAGTGGTGTCCAGAACCAACGCGTTTGATTATGCAGAGTCTGATTATGAAGTAAATTTGTGCGATGAGTTAGATAGCTCCGTTTATTGCCCTCTCTGTGGAGTTGATATTTCTAATTTAACGGAGGAACATCGATACCTTCATACAAATCACTGTCTTGATAAAAATGAAGAAAATGTTGTTCTTCCTAATGACGATGTGAACGCTAAATTTGTGTCGAAAGCCTCTCCTGTTGTGGATTGGCTACGAGATATCGGTTTAGATAAATATGAAGAAGTTTTTGTTAGGGAAGAAGTTGATTGGGAGACCTTGCAATGGCTGACAGAAGAGGATCTCTTAAACATGGGTATAACTGCACTTGGTCCTAGAAAAAAGATTGTTCATGCTCTGTCAGAACTTAGAAGAGGAATTGACCCTTCAAACGAGAAACCTGAGGATGATGTGGTAGAGCCTAGAAGGATTAGAAACCAGAAAGTCAAATCGCAACATGGCAAATCTGATCGAAAAATTGACGGCACTGTTAAACCAGCCGCAAACAAATTAATTACTGAATATTTTCCGGGATTTGCTACCAACGGGAAGAAAGTTTCTGCCCCTCCTGGAGAACAACATGAAATGAAAAATAATGGCTCAGTTTCTGACCGTAAGCGCAAAGCAAAAAATATGTCAACGAGTACAAAGATTCGTGATGTTCCTATATGGTGTACCATTCAAGGAACACCTTTCCGTGTGGATGCTTTCAAATACCTACGAGGAGATTGTTCTCACTGGTTTCTAACACACTTCCACATGGACCATTATCAAGGTCTCACCAAGTCGTTCAATCATGGAAAGATCTATTGCTCCTCTGTTACAGCCAGACTTGTAAATATGAACATCGGTATTCCATATGAAAAATTACATATTTTGCCTCTAAACCAAAAGGTTGAAATAGCTGGTATTGGCGTGACTTGCTTGGATGCCAACCACTGTCCAGGTGCCATAATAGTACTCTTTGAACCTCCAAATGGTAAGGCGGTACTTCACACAGGCGATTTTCGGTATAGTGAAGAAATGTCAAACAATCCTTTCCTGCGGATATGTCCAATTCATACCTTAATTCTTGATACCACATACTGCAACCCACAGTATGACTTTCCAAAACAAGAGGCTGTAATACAATTTGTTATTGATGCCATTCAAGCAGAAGCTTTTAATCCCCGGACTCTTTTTCTGATTGGCAGCTATACAATTGGAAAAGAAAGGCTATTCTTGGAGGTTGCTCGTTCACTTCGCAAAAAGGTTTATGTGACTGCAGCAAAGTATCGCATTTTAAAATGTTTGGAGTTTACGGAGGAGGATATGCAGTGGTTTACTTTAAATGAACATGAAAGCAATATTCATGTTGCTCCTATGTGGACACTCGCAAGCTTCAAAAGATTGAAGTATTTATCAAGTCAATATGCAAGTCGGTACAGTCTTATGGTTGCTTTCTCTCCTACTGGCTGGACATTTGGCAAAGGTAAAAAGAAGTCTCCTGGAAGAAGGTGGCAGCAGGGTACTATTATAAGGTATGAGGTTCCTTACAGTGAGCATTGCAGCTTTACAGAACTCAAAGAGTTAGTAAACATTTTGTCTCCCAATAACATTATTCCAAGTGTGAATAATGATGGACCAGAATCTGCAGCCGCAATGGTTTCTCTTATGTCAACTTGA 2832 0.3888 MANPNHYSMASNKAQSSSSTNVFRSTPSLSTQPMSQVALLVMITNNNVSSPFDYFKDLNKDREVWKFDIRIVDVWYVLGKYGQLHVEMAFVDVKGDRIHVAVPKDYVVGFKDTLKEHTTYIMHNYSVVDNDDQFKVCDHRYKLMFNSGTTLTDEKLVIFLVENVKREGVGKKVQASFNKKDLRNTIVSRSVLLRALLHQNMDGSITHVTNATGKLTRLFLTSLQTLSATLSFKISFLKDLPVGNGVIISFKCGCDRSQRRGKLSSIVMDSLHHTHFDENDDFEVPLTQTQTPTSKPLVDLNNQRPSKKPKIKTTPFSGKENIPPYYHSHNDGYEIDNCSLDFIPSTLDSDTTVQTVCSSVSELKKKNTRTYFHNSIESKLVVSRTNAFDYAESDYEVNLCDELDSSVYCPLCGVDISNLTEEHRYLHTNHCLDKNEENVVLPNDDVNAKFVSKASPVVDWLRDIGLDKYEEVFVREEVDWETLQWLTEEDLLNMGITALGPRKKIVHALSELRRGIDPSNEKPEDDVVEPRRIRNQKVKSQHGKSDRKIDGTVKPAANKLITEYFPGFATNGKKVSAPPGEQHEMKNNGSVSDRKRKAKNMSTSTKIRDVPIWCTIQGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTKSFNHGKIYCSSVTARLVNMNIGIPYEKLHILPLNQKVEIAGIGVTCLDANHCPGAIIVLFEPPNGKAVLHTGDFRYSEEMSNNPFLRICPIHTLILDTTYCNPQYDFPKQEAVIQFVIDAIQAEAFNPRTLFLIGSYTIGKERLFLEVARSLRKKVYVTAAKYRILKCLEFTEEDMQWFTLNEHESNIHVAPMWTLASFKRLKYLSSQYASRYSLMVAFSPTGWTFGKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKELVNILSPNNIIPSVNNDGPESAAAMVSLMST 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02884 943 Gene3D - 450 525 IPR013761 -
Car05g02884 943 SUPERFAMILY SAM/Pointed domain 454 514 IPR013761 -
Car05g02884 943 Gene3D - 616 926 IPR036866 -
Car05g02884 943 CDD SNM1A-1C-like_MBL-fold 602 754 - -
Car05g02884 943 Pfam DNA repair metallo-beta-lactamase 825 929 IPR011084 -
Car05g02884 943 MobiDBLite consensus disorder prediction 288 315 - -
Car05g02884 943 Gene3D - 757 904 - -
Car05g02884 943 ProSiteProfiles SAM domain profile. 452 515 IPR001660 GO:0005515
Car05g02884 943 PANTHER DNA CROSS-LINK REPAIR 1A PROTEIN 405 941 - -
Car05g02884 943 Pfam SAM domain (Sterile alpha motif) 455 513 IPR001660 GO:0005515
Car05g02884 943 MobiDBLite consensus disorder prediction 587 602 - -
Car05g02884 943 CDD RPA1_DBD_A_like 69 150 - -
Car05g02884 943 SUPERFAMILY Nucleic acid-binding proteins 51 151 IPR012340 -
Car05g02884 943 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 405 941 - -
Car05g02884 943 CDD SAM_superfamily 457 511 - -
Car05g02884 943 MobiDBLite consensus disorder prediction 572 602 - -
Car05g02884 943 Pfam Beta-lactamase superfamily domain 637 756 IPR001279 -
Car05g02884 943 Pfam Domain of unknown function DUF223 88 155 IPR003871 -
Car05g02884 943 MobiDBLite consensus disorder prediction 1 27 - -
Car05g02884 943 SUPERFAMILY Metallo-hydrolase/oxidoreductase 621 925 IPR036866 -
Car05g02884 943 SMART SAM_4 450 515 IPR001660 GO:0005515
Car05g02884 943 Gene3D - 54 153 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02884 Car-Chr5 73807567 73819045 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02884 K15340 - gmx:100816321 982.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02884 05 73807567 73819045 Car05g02884 05 73807567 73819045 ECH