Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02883 ATGGCGGCGGAGGACGGGTGGTGTGTGGTCACTGGAGGTCGAGGATTTGCTGCTCGTCATTTGGTTGAAATGCTAATCCGATGCAACACGTACTGCGTTCGCATCGCCGATTTGGGACCCACCATTGAACTTGAACCCTCCGAGCAATTGGGGATTCTCGGCCAAGCATTGCACACTGGTCGTGCTCAATATGTCTCAATCGATCTTCGCAACAAAGCCCAAGTTTTAAAAGCATTGGAAGGAGCTGAGGCTGTGTTCCATATGGCTGCTCCCAACTCTTCTATTAATAACTACCAGCTGCATTATTCCGTCAGTGTTGAAGGAACAAAGAATGTCATTGATGCTTGTGTGGAGCTAAAAGTGAAGAGACTCATTTATACCAGTTCTCCTAGTGTTGTTTTTGATGGAGTTCATGGAATTCAAAATGGGAACGAAACATTGCCTTATCCACCTTCGCATAATGACCATTATTCAGCAACAAAAGCACAGGGTGAGGCAATTGTCATTAAGGCTAATGGGACTGGTGGACTCTTGACATGCTGCATACGCCCTAGCAGCATTTTTGGGCCTGGTGATAAACTGTTGGTGCCTTCACTGGTTGATGCTGCCAGGGCAGGGAAATCCAAGTTCATTATTGGTGATGGTAATAACATATATGATTTCACATATGTTGAAAATGTGGCTCATGCCCATATATGTGCCGATCGAGCTCTAGCTTCAGAGGGAACCATTTCAGAAAAAGCTGCAGGAGAGGCATATTTCATCACGAATATGGAACCTATAAAGTTTTGGGAGTTCATGTCTCTGATTTTGGAAGGTCTTGGATATCAAAGGCCAAAAATAAAGATCCCTGCCTTTGTTGTCATGCCAATTGCACATTTGGTGGAGTGGATATATAGGCTGCTTGGCCCATATGGGATGAAGGTGCCTCAGCTGACCCCTTCAAGAATAAGACTCTTATCTTGCACCAGATCTTTTGATTCCTCAAAAGCAAAGGATCGCCTTGGCTATGCACCCATCATAACTCTACAGgagggcatgcggagaacAATTGAATCATATCAACATCTGAGGGCCGAAAATCAACCTAAGTCTATAAGAGAAGGTCCCTCCAAAGCTTCTGTATATCTTGGAAGTGGAAGAGTTGCTGACACATTGCTTTGGAAGGATAGAAAGCAAACTTTCACTACATTGTTGGTCTTGATAGCAATATATGTCAACTTCATTGCATCTGAGAATACCTTCGTCACTGCTCTTACAAAGCTTCTATTGTTCACATCGATCTCTTTATTTGTTCATGGCATTCTTCCTGCAAAAATATTGGGGTACACTGTTGAGAAAATACCCACGTCATGGTTTAACTTATCAGAAGACACGTCACATCAAATTACGCTCTCAGTAGCCTCATCTTGGAATTTTGCTGTGAATGCTTTAAAATCCCTTGCTGAAGGGAATAATTGGGGGTTGTTCTTCAAGGTTATTTTCTCTTTGCTCATTATTAGCTTCCTGGGAGCTTTTTCATTTCAGAACTTGTATACTATAGGACTTGCCTTAGCATTTATAGCTTTCTATGTTTATGAAAAGAAGGAGGAAGACATTGACGGCATATTTATAAAAACACATACTTTTGGGTGCAAATTGAAATCTGATTTCACCAAGAAGTTTCTTACTTCAAAGAAGAATGATTGA 1689 0.4144 MAAEDGWCVVTGGRGFAARHLVEMLIRCNTYCVRIADLGPTIELEPSEQLGILGQALHTGRAQYVSIDLRNKAQVLKALEGAEAVFHMAAPNSSINNYQLHYSVSVEGTKNVIDACVELKVKRLIYTSSPSVVFDGVHGIQNGNETLPYPPSHNDHYSATKAQGEAIVIKANGTGGLLTCCIRPSSIFGPGDKLLVPSLVDAARAGKSKFIIGDGNNIYDFTYVENVAHAHICADRALASEGTISEKAAGEAYFITNMEPIKFWEFMSLILEGLGYQRPKIKIPAFVVMPIAHLVEWIYRLLGPYGMKVPQLTPSRIRLLSCTRSFDSSKAKDRLGYAPIITLQEGMRRTIESYQHLRAENQPKSIREGPSKASVYLGSGRVADTLLWKDRKQTFTTLLVLIAIYVNFIASENTFVTALTKLLLFTSISLFVHGILPAKILGYTVEKIPTSWFNLSEDTSHQITLSVASSWNFAVNALKSLAEGNNWGLFFKVIFSLLIISFLGAFSFQNLYTIGLALAFIAFYVYEKKEEDIDGIFIKTHTFGCKLKSDFTKKFLTSKKND 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02883 562 ProSiteProfiles Reticulon domain profile. 382 534 IPR003388 -
Car05g02883 562 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 356 IPR036291 -
Car05g02883 562 PANTHER 3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 1 4 411 - -
Car05g02883 562 Gene3D - 1 359 - -
Car05g02883 562 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 9 284 IPR002225 GO:0003854|GO:0006694|GO:0016616
Car05g02883 562 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 4 411 - -
Car05g02883 562 Pfam Reticulon 382 537 IPR003388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02883 Car-Chr5 73800459 73806634 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02883 9 371 Lipid Metabolism Gene Families AT2G33630 32.984 1.18e-47 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02883 K23558 - gmx:100816854 954.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02883 05 73800459 73806634 Car05g02883 05 73800459 73806634 ECH