Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02857 ATGGATTTGCAATTGAGGCAATTCGGTTTCGACCCTCGTCTAGTGGATTTCCTTTTGGACCACCTAGACTTTTCAGACGAAACCGACACGAAAGCACACCACGCGCCATCTCGCGCGTACGTTCGTGACTCAAAGGCAATGGCAAGCACGTATGCTGACATACTCGACTACCCTGATTCGTACAAATTCGTGGTGGACATGCCTGGGTTAAAATCTGAACAAATAAAAGTAACAATGGAAGATGATAGCACGCTTGTggtgaatggagagaggagaagggacaaagataaggatcaaaaagaaggTGTTAAGTATTTGCGGATGGAGAGGAAACAAGGCAAGTTTCTTAAGAAATTTCAGCTTCCTGAAAATGCCAATAGTGATGATATTTCTGCTAATTATGTTGATGGTGTGCTTACTGTTACTATTTCTAAGAGGCCGCCTCCTGAGCCCAAGAAGCCCAAGACTATTCAGGTCCAAGTTAGTTCTCTCGGACCAGAAACTCAGGCCCAAGCCCAACCTCAGATTGATGAATTACCCCGTAATGGCCTTGACTCCCAGGCTTGA 567 0.4162 MDLQLRQFGFDPRLVDFLLDHLDFSDETDTKAHHAPSRAYVRDSKAMASTYADILDYPDSYKFVVDMPGLKSEQIKVTMEDDSTLVVNGERRRDKDKDQKEGVKYLRMERKQGKFLKKFQLPENANSDDISANYVDGVLTVTISKRPPPEPKKPKTIQVQVSSLGPETQAQAQPQIDELPRNGLDSQA 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02857 188 SUPERFAMILY HSP20-like chaperones 33 154 IPR008978 -
Car05g02857 188 MobiDBLite consensus disorder prediction 143 188 - -
Car05g02857 188 MobiDBLite consensus disorder prediction 156 188 - -
Car05g02857 188 Pfam Hsp20/alpha crystallin family 54 160 IPR002068 -
Car05g02857 188 Gene3D - 16 161 IPR008978 -
Car05g02857 188 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 43 162 IPR002068 -
Car05g02857 188 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 14 170 - -
Car05g02857 188 PANTHER 17.1 KDA CLASS II HEAT SHOCK PROTEIN-LIKE 14 170 - -
Car05g02857 188 CDD ACD_sHsps-like 53 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02857 Car-Chr5 73580112 73581029 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02857 K13993 - egr:104436331 202.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02857 05 73580112 73581029 Car05g02857 05 73580112 73581029 ECH