Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02856 ATGGATTTCAGATTAATGGGTTTAGATTCACCACTATTGAACACACTGCACCACATAATGAACATAACTGACGACACAACAGAGAAGAACCTAAACGCACCAACACGAACCTACGTACGCGACGCAAAGGCAATGGCAGCGACACCTGCAGACGTGAAAGAGTATCCAAATTCATACGTATTCGTTGTTGACATGCCTGGGTTGAAATCTGGTGACATTAAGGTTCAAGTGGAAGATGACAATGTGCTTCTCATAAGTGGTGAGAGAAAGAGAGAAGAAGAGAAAGAAGGGGTTAAGTATTTGAAGATGGAAAGAAGGGTTGGTAAGTTTATGAGGAAATTTGTGTTGCCTGAAAATGGTGATGTTGAAGGGATTTCTGCTGTTTGTGAAGATGGTGTGCTTACTGTTACTGTTAATAAGTTGCCTCCTCCTGAACCTAAGAAGCCTAAGACAATTGAGTCCTGGGGATAA 471 0.4183 MDFRLMGLDSPLLNTLHHIMNITDDTTEKNLNAPTRTYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKEGVKYLKMERRVGKFMRKFVLPENGDVEGISAVCEDGVLTVTVNKLPPPEPKKPKTIESWG 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02856 156 Pfam Hsp20/alpha crystallin family 51 153 IPR002068 -
Car05g02856 156 SUPERFAMILY HSP20-like chaperones 29 149 IPR008978 -
Car05g02856 156 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 8 153 - -
Car05g02856 156 PANTHER 18.0 KDA CLASS II HEAT SHOCK PROTEIN 8 153 - -
Car05g02856 156 Gene3D - 10 153 IPR008978 -
Car05g02856 156 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 41 155 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02856 Car-Chr5 73577527 73578511 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02856 K13993 - gmx:111605749 245.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02856 05 73577527 73578511 Car05g02856 05 73577527 73578511 ECH