Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02855 ATGCGGATGAAAAGGGAGAGGAAGAAGAAAAAGAGTGATGGCGGTCGCCAACAAAATGAAGAAAAGAAGACGACGTTGAAGGGAGCTGAGAGGTCTGCATATTTCGCACGGAGAGAAGCCGCAAAGGTATTGAAAACAGTACTCGTTGGAGACGCTAAACGCCGTGCACTTGCATCCATCAAAACCCTCGTTTATCATCCCTCCGTCAGAAACAAGAAAGCCACATTCGCTCTCATCTGTCAAACCCTCAAGCATCTTCCCATTATCAACGATGTCTTGCAAGCTGCTTCTATTATCAACTCCAAGTGGAAGAGGCAACAAGAATTGATTTATATCATTGTCTATGATATCCTTTTCGGCCAGGGAGTTCCGCTAGTTGGTGATGCAGAGAAGTACCTTATGCGCCACAAGGATGCCTTACATTCAACTCTGAAACAGATTTTGTCAAGGAAAAATGTCAAGACAGTTAAAGAGTTGTTTGCTCTTCACGAGGTTCCTGATGTTTCTGTACCTCGAAATGTTCGTGTCAATACACTTAAACTGGATGTTGATTCTGCCTTAGTTGAACTTCGGAAAAAATACACGGTTCAAAAGGATGATTTAATTCCTGACTTGCTGATACTCCCTCCCGGAACTGATTTACATGACCATCCTCTTGTCAAGAACGGAAGCATATTTCTGCAAGGTAAGGCGAGTTCCATGGTGGCACCGGCTCTTAGCCCTGAACCAGGTTGGGAGGTTCTTGATGCATGCTCAGCACCAGGCAACAAAACTGTCCACCTTGCTGCCCTTATGAAGAGAAAGGGTAGGATTATAGCATGTGAGCTGCAAAAGGAAAGGATTAAGCGCTTGAATGATACTATAAAGCTATCTGGGGCTTCCAACATACAGGTTCTCAATGAGGATTTCTTGAACATAAATCCCAAGGACCCTTCATATTCTAAGATAAAAGCTATTCTCTTGGATCCTTCCTGCTCTGGTTCTGGTACTGCTGCTTCTAGACTAGACCATTTGCTCCCATCTAAAGCAGCAGGTCAGGATATTGATATGGAAAGATTAAACAAGCTTGCAGCTTTTCAGAGAAAAGCTCTTCAGCATGCCTTCCTTTTTCCAGCTGTTGAGAGAATTGTGTACAGTACATGTTCAATAAACCAAATTGAGAATGAAGATGTTGTGAAATCTGTTTTGCCCTTAGCTGAGTCATATGGATTCCAACTGGCAAAGCCCTTCCCTGAATGGCAGTGTCGTGGTCTTCCGGTGTTTGAAGGCTCTGAACACCTAGTTAGGACAGATCCTGCCAAGCATGGTGAGGGTTTCTTCATCGCGTTGTTTTCCAAGAAAGATGCTAAGCTCTCGGTGAGGTCAAATAATAATGATAATAGGAATATTCACAGTTCTACCAGAACTAGAAACTTGCGAAGGAAGAAACCGATGTTAATTCACACTAATCTGTTCAGAATGTGGTTATATGGTCATCTAAACCGGTGTAGAATACAAGACAAATCGTTTAGTGGTTAA 1518 0.4295 MRMKRERKKKKSDGGRQQNEEKKTTLKGAERSAYFARREAAKVLKTVLVGDAKRRALASIKTLVYHPSVRNKKATFALICQTLKHLPIINDVLQAASIINSKWKRQQELIYIIVYDILFGQGVPLVGDAEKYLMRHKDALHSTLKQILSRKNVKTVKELFALHEVPDVSVPRNVRVNTLKLDVDSALVELRKKYTVQKDDLIPDLLILPPGTDLHDHPLVKNGSIFLQGKASSMVAPALSPEPGWEVLDACSAPGNKTVHLAALMKRKGRIIACELQKERIKRLNDTIKLSGASNIQVLNEDFLNINPKDPSYSKIKAILLDPSCSGSGTAASRLDHLLPSKAAGQDIDMERLNKLAAFQRKALQHAFLFPAVERIVYSTCSINQIENEDVVKSVLPLAESYGFQLAKPFPEWQCRGLPVFEGSEHLVRTDPAKHGEGFFIALFSKKDAKLSVRSNNNDNRNIHSSTRTRNLRRKKPMLIHTNLFRMWLYGHLNRCRIQDKSFSG 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02855 505 MobiDBLite consensus disorder prediction 12 27 - -
Car05g02855 505 CDD AdoMet_MTases 247 335 - -
Car05g02855 505 Gene3D Sun protein; domain 3 163 227 - -
Car05g02855 505 PANTHER BNAA09G04380D PROTEIN 24 473 - -
Car05g02855 505 ProSiteProfiles SAM-dependent MTase RsmB/NOP-type domain profile. 162 447 IPR001678 GO:0008168
Car05g02855 505 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 173 446 IPR029063 -
Car05g02855 505 PRINTS RNA (C5-cytosine) methyltransferase signature 219 233 IPR023267 GO:0001510
Car05g02855 505 PRINTS RNA (C5-cytosine) methyltransferase signature 248 258 IPR023267 GO:0001510
Car05g02855 505 PRINTS RNA (C5-cytosine) methyltransferase signature 317 329 IPR023267 GO:0001510
Car05g02855 505 PRINTS RNA (C5-cytosine) methyltransferase signature 373 389 IPR023267 GO:0001510
Car05g02855 505 PRINTS RNA (C5-cytosine) methyltransferase signature 429 446 IPR023267 GO:0001510
Car05g02855 505 MobiDBLite consensus disorder prediction 1 27 - -
Car05g02855 505 Pfam 16S rRNA methyltransferase RsmB/F 238 444 IPR001678 GO:0008168
Car05g02855 505 PANTHER NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 24 473 IPR023267 GO:0001510
Car05g02855 505 Gene3D Vaccinia Virus protein VP39 228 454 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02855 Car-Chr5 73572163 73577109 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02855 K15264 - gmx:100811850 790.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02855 05 73572163 73577109 Car05g02855 05 73572163 73577109 ECH