Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02853 ATGGAAGGGATGATGCAGTTACCATACAAGACGACGGTGAAGCTGATGCTTGGTTCACTTGAGCGTAATTTGCTCCCTGATGCTCTCATAAGAACATTCACACGTTTGCTTTTGGCTACTCGTCTTCGCTCTGGTTACAAATCTTCCTCTCAACTTCAGCTCTCTCATCTTCTTCAATTTGTACACTCTTTACAAGAGATGTCTATTGCAGTCAATACTGATAAGCCAAAATCCCAACATTATGAATTACCAACCTCTTTCTTCAGGCTGGTTCTTGGAAATAATCTTAAATACAGTTGTTGTTATTTCTCTTCGGCCTCAAAGACACTAGAAGATGCTGAAGAAGAAAGTTTGAAACTGTATTGCGAGAGATCAAACCTGAAAGATGGTCATGCAGTTCTTGACATTGGATGCGGTTGGGGGTCACTGACTTTATACATTGCCAAGAATTACAGTAATTCCAGGGTTACAGGAATCTGCAATTCCACTGCTCAAAAAGCTTATATCGAGGAGAAATGCTTGGAGCTGGAGCTGCAAAATGTGGATATCATTGTTGCAGACATTAGCACTTTTGAAATGGAAGCTTCTTATGACAGAATATTTTCCATAGGAATGTTTGAGCATATGAAGAACTATAAAGATCTTCTCAACAAGATATCCAAATGGATGAAAGAAGATAGCCTTTTATTTGTTCATCATTTCTGCCACAGAGTATTTGCCTACCACTTTGAGAACAAAAATGATGATGATTGGATTACAAGATACTTCTTTACTGGAGGAACTATGCCTGCCGCAAATCTACTTCTTTATTTCCAAGATGATGTTACTGTTGTAAACCATTGGCTGGTAAATGGGAaacactacgcacagaccagTGAAGAGTGGCTCAAAAGAATGGATAAGAACATGAGTTCCATCAAGCCAATTATGGAATCAACGTATGGCAGAGATTCAGCTACTAAATGGACTGTATATTGGAGAACATTTTTCATAGCTGTAGCAGAACTTTTTGGATACAATAATGGCGATGAATGGATGGTTGCACACTTTCTTTTCAAAAAGAAAGCCCGAAACCATTTTTCCCTTGATTTGTCATTTGACTAG 1104 0.3777 MEGMMQLPYKTTVKLMLGSLERNLLPDALIRTFTRLLLATRLRSGYKSSSQLQLSHLLQFVHSLQEMSIAVNTDKPKSQHYELPTSFFRLVLGNNLKYSCCYFSSASKTLEDAEEESLKLYCERSNLKDGHAVLDIGCGWGSLTLYIAKNYSNSRVTGICNSTAQKAYIEEKCLELELQNVDIIVADISTFEMEASYDRIFSIGMFEHMKNYKDLLNKISKWMKEDSLLFVHHFCHRVFAYHFENKNDDDWITRYFFTGGTMPAANLLLYFQDDVTVVNHWLVNGKHYAQTSEEWLKRMDKNMSSIKPIMESTYGRDSATKWTVYWRTFFIAVAELFGYNNGDEWMVAHFLFKKKARNHFSLDLSFD 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02853 367 Pfam Mycolic acid cyclopropane synthetase 78 325 - -
Car05g02853 367 CDD AdoMet_MTases 133 234 - -
Car05g02853 367 PIRSF CmaB 15 364 IPR003333 GO:0008610
Car05g02853 367 Gene3D Vaccinia Virus protein VP39 70 349 IPR029063 -
Car05g02853 367 PANTHER - 4 355 - -
Car05g02853 367 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 4 355 - -
Car05g02853 367 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 78 347 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02853 Car-Chr5 73557385 73562819 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02853 78 326 Acyl Lipid Metabolism Gene Families AT3G23530 26.772 2.83e-19 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02853 - - cam:101505684 662.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02853 05 73557385 73562819 Car05g02853 05 73557385 73562819 ECH