Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02850 ATGGATCAGTTCAAAGGACAACCTCGTCTTCCCAAATTCGCCGTTCCTAAACGTTACGACATTAGGCTCAAACCCGACCTCATCGAATGCCGTTTTTCAGGTTCCGTCTCCGTTAATCTCGACATCGTCATCGCCACCACTTTCATCGTTCTCAATGCCGCTGAACTATCCGTCACTAACGACTCCGTTTCATTCACCAATCGCGATTCGTCTAAGGTTTTTAAACCTTCTAGAGTTGAATTGTTTGAAAATGATGAAATTCTGGTATTGGAGTTTCCGGAGGAAATACCTGTTGGATTGGGTGTATTATCTATTCAGTTTGAAGGAATATTGAATGATAAAATGAAAGGTTTTTATAGAAGTAAATATGAGCACAATGGTGAGAAGAGGAATATGGCAGTTACACAGTTTGAACCAGCTGATGCTAGACGATGCTTTCCTTGTTGGGATGAACCTGCTTGCAAGGCTACTTTCAAGATCACATTGGATGTGCCTTCAGACCTTGTAGCTCTCTCCAACATGCCCATTGCTGAAGAAAAAATTGATAGAAATCTCAAAACAGTTACATACCAAGAATCACCAATCATGTCTACATACTTGGTTGCTGTTGTTGTTGGTTTATTTGATTATGTGGAAGATCATACTTCCGATGGGGTCAAAGTCCGAGTGTATTGTCAAGTTGGTAAGGCAAACCAAGGGAAATTCGCACTTGATGTTGCTGTGAAAACTTTGGGACTATACAAAGATTACTTTGACACTCCCTACACACTGCCAAAATTGGATATGATTGCAATACCTGATTTTGCTGCTGGAGCCATGGAGAATTATGGCTTGGTTACATACCGGGAGACTGCTTTACTCTATGATGATCAGAATTCTGCTGCTGCTAACAAACAGAGGGTTGCAATTGTTGTAGCTCATGAACTAGCACATCAGTGGTTTGGCAATCTTGTTACAATGGAGTGGTGGACACATTTATGGCTGAATGAGGGTTTTGCAACATGGGTGAGTTACTTGGCAGCTGATGGCTTGTTTCCTGAGTGGAAAATATGGTCTCAATTTCTTCATGAATGTACTGCGGGTCTTAGGTTGGATGGGCTCGCAGAATCCCACCCGATTGAGGTGGAGATAAATCATGCACGCGAGATTGATGAAATATTTGATGCAATAAGTTATAGAAAAGGTGCATCTGTGATTAGGATGCTGCAAAGCTATCTTGGCGCTGAATGCTTTCAGAGGTCACTAGCTTCATATATAAAAAGGCATGCTTGCTCAAATGCTAAGACTGAGGATCTATGGGCTGCACTTGAGGAAGGATCTGGTGAACCTGTGAATAAGTTAATGACGTCATGGACAAAACAGCAAGGATATCCTGTTGTAACTGTTAAAGTCAATAATCAGAATTTGGAGTTTGATCAGTCACAATTTTTGTCAAGTGGTGCTCAAGGGGAAGGCCATTGGATTATTCCAATAACCCTATGCTTTGGCTCATATGATGTCCGCAAGAATTTCCTCTTGCAAACAAAAACGGAAACACGTGATGTTAAAGAGTTACTGGGTTCCCAGATTGCTGACAAGGGTGGAAATTCTTGGATTAAACTTAATGTGGAGCAGGCTGGTTTCTACAGGGTGAAATATGATGAACTGCTTGCAGCTAAACTTAGACATGCAGTGGAGAAACAGTTGTTATCTCCATCAGACCGGTTTGGAATTTTGGATGATACATATGCACTTTGTATGGCTGGCAAAGAATCATTGACCTCCTTGATTAACTTGATGGGAGCTTATAGGGAGGAAGTTGATTATACTGTGCTGTCTAACCTGATTTCTATAAGTCATAAAGTTGGATCTATTGCAGCTGATGCAGTTCCAGACTTACTAGATTATTTCAAACAGTTCTTTGTTAACCTTTTCCAGTTCTCTGCCGAGAGGCTCGGTTGGGATCCTAAACCAGGTGAAAGTCACGATGATGCATTGCTGAGAGGAGAAATTTTGACTTCCCTTGCCGAGTTTGGGCATGATCAGACACTGGATGAAGCAAGCAAGCGGTTTCAAGCATTCTTAGAAGACAGAAATACTCCACTTCTTCCACCTGATATAAGAAGGGCAGTTTATGTGGCTGTAATGAAACGGGCAAGCAAATCTAACCGATTGGGTTATGAATCCCTTCTGAAAGTATACAGAGAAACTGACCTTAGTCAAGAGAAAACACGTATTCTTGGCTCACTGGCTTCTTCACTTGATCCAGATCTAATTCTTGAAGTTCTTAACTTTATGTTATCTTCCGAGGTTCGGAGTCAGGATGCTGTTTTTGGACTTGGTGTCAGTCAGGAAGGAAGAGACGTGGCTTGGGCGTGGCTTAAGGAAAATTGGGAACACATCTCAAAAACATATGGTGGTGGATTTTTAATAACTCGCTTTGTCAGTGCAGTTGTCTCACCGTTTGCTTCACTTGAGAAGGCCAAGGAAGCAGAGGATTTCTTTGCTAGCCATCCTATGCCATCCATTGCTAGAACTTTGAAGCAGAGCCTTGAGCGCGTGAATATAAATGCAAACTGGGTTCAGAGTGTTCAGAATGAGAAAAGTCTTGCTGATGCTATAAAGGAGTTGGCATACAGGAAATACTAG 2628 0.4182 MDQFKGQPRLPKFAVPKRYDIRLKPDLIECRFSGSVSVNLDIVIATTFIVLNAAELSVTNDSVSFTNRDSSKVFKPSRVELFENDEILVLEFPEEIPVGLGVLSIQFEGILNDKMKGFYRSKYEHNGEKRNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSDLVALSNMPIAEEKIDRNLKTVTYQESPIMSTYLVAVVVGLFDYVEDHTSDGVKVRVYCQVGKANQGKFALDVAVKTLGLYKDYFDTPYTLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQNSAAANKQRVAIVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADGLFPEWKIWSQFLHECTAGLRLDGLAESHPIEVEINHAREIDEIFDAISYRKGASVIRMLQSYLGAECFQRSLASYIKRHACSNAKTEDLWAALEEGSGEPVNKLMTSWTKQQGYPVVTVKVNNQNLEFDQSQFLSSGAQGEGHWIIPITLCFGSYDVRKNFLLQTKTETRDVKELLGSQIADKGGNSWIKLNVEQAGFYRVKYDELLAAKLRHAVEKQLLSPSDRFGILDDTYALCMAGKESLTSLINLMGAYREEVDYTVLSNLISISHKVGSIAADAVPDLLDYFKQFFVNLFQFSAERLGWDPKPGESHDDALLRGEILTSLAEFGHDQTLDEASKRFQAFLEDRNTPLLPPDIRRAVYVAVMKRASKSNRLGYESLLKVYRETDLSQEKTRILGSLASSLDPDLILEVLNFMLSSEVRSQDAVFGLGVSQEGRDVAWAWLKENWEHISKTYGGGFLITRFVSAVVSPFASLEKAKEAEDFFASHPMPSIARTLKQSLERVNINANWVQSVQNEKSLADAIKELAYRKY 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02850 875 PANTHER AMINOPEPTIDASE 3 871 - -
Car05g02850 875 Pfam ERAP1-like C-terminal domain 531 848 IPR024571 -
Car05g02850 875 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 9 206 IPR042097 -
Car05g02850 875 Gene3D - 457 546 - -
Car05g02850 875 Gene3D Neutral Protease Domain 2 209 456 IPR027268 -
Car05g02850 875 Gene3D tricorn interacting facor f3 domain 3 208 IPR042097 -
Car05g02850 875 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 215 462 - -
Car05g02850 875 Pfam Peptidase family M1 domain 235 451 IPR014782 GO:0008237|GO:0008270
Car05g02850 875 PRINTS Membrane alanyl dipeptidase (M1) family signature 143 158 IPR001930 GO:0006508
Car05g02850 875 PRINTS Membrane alanyl dipeptidase (M1) family signature 190 205 IPR001930 GO:0006508
Car05g02850 875 PRINTS Membrane alanyl dipeptidase (M1) family signature 268 278 IPR001930 GO:0006508
Car05g02850 875 PRINTS Membrane alanyl dipeptidase (M1) family signature 304 319 IPR001930 GO:0006508
Car05g02850 875 PRINTS Membrane alanyl dipeptidase (M1) family signature 323 335 IPR001930 GO:0006508
Car05g02850 875 CDD M1_APN-Q_like 18 453 IPR034016 -
Car05g02850 875 PANTHER PROTEASE M1 ZINC METALLOPROTEASE 3 871 - -
Car05g02850 875 Gene3D - 548 862 - -
Car05g02850 875 Pfam Peptidase M1 N-terminal domain 15 200 IPR045357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02850 Car-Chr5 73542040 73547966 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02850 K08776 - gmx:100811437 1543.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02850 05 73542040 73547966 Car05g02850 05 73542040 73547966 ECH