Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02844 ATGGATTCTTCTCAAGGTTCTACGTTGGCTCGTTATGTGAAAAATGCTTCTATTCAGAGGGATGAATCTTGTTTCGATGGTGTTCCTGTTTATGTTAAGGAGCTTATTGCTGGTGGTTTTGCTGGTGCGCTTTCTAAGACTTCTGTTGCACCCCTTGAACGGGTCAAGATACTTTGGCAGACAAGGACGGGAGGATTTCATACTCTTGGTGTGTACCAATCTATGAATAAGTTGATAAAGCATGAAGGCTTCCGAGGATTATATAAGGGAAATGGGGCTAGTGTTGTCCGGATTGTTCCTTATGCAGCTTTGCATTTTATGACATATGAGCGGTATAAAAGTTGGATCCTGAATAATTATCCCATGTTAGGAACAGGTCCTTCTATTGATCTTTTAGCTGGCTCAGCAGCAGGGGGAACTTCAGTTTTATGTACATACCCCTTAGATCTTGCTCGTACCAAACTTGCTTATCAGGTGGTTGACACAAAAGGATATATCAAAGATGGTATTAAAGGAGTTCATTCTCAATCTGTAGGTCCTGTACATAATGGGATTAAAGGTGTACTTACAAGCGCTTATAAGGAAGCTGGAGTTCGTGGACTTTATAGGGGTGTAGGTCCAACCCTTACTGGAATTCTTCCATATGCCGGTTTAAAGTTCTATACGTATGAGAAGTTGAAGATGCATGTTCCTGAAGAACATCAGAAGTCCATTTTGATGCGCCTTTCTTGTGGAGCACTTGCTGGATTGTTTGGGCAGACTTTAACGTACCCTTTGGACGTTGTTAAGAGACAAATGCAGGTTGGGAGCTTGCAAAAGGCAGATCATGGAGATGCCAGATACAGAAATACATTTGATGGACTTAGGAAGATTGTTCAAAATCAAGGTTGGAGGCAGTTGTTTGCAGGCGTAAGCATAAACTACATAAGGATTGTTCCTTCAGCCGCAATTAGTTTCACCACTTATGACATGATGAAGGCTTGGTTAGGCGTACCTCCCCAACAAAGGTCCCAATCAGTTTCATCAGGATAA 1032 0.4196 MDSSQGSTLARYVKNASIQRDESCFDGVPVYVKELIAGGFAGALSKTSVAPLERVKILWQTRTGGFHTLGVYQSMNKLIKHEGFRGLYKGNGASVVRIVPYAALHFMTYERYKSWILNNYPMLGTGPSIDLLAGSAAGGTSVLCTYPLDLARTKLAYQVVDTKGYIKDGIKGVHSQSVGPVHNGIKGVLTSAYKEAGVRGLYRGVGPTLTGILPYAGLKFYTYEKLKMHVPEEHQKSILMRLSCGALAGLFGQTLTYPLDVVKRQMQVGSLQKADHGDARYRNTFDGLRKIVQNQGWRQLFAGVSINYIRIVPSAAISFTTYDMMKAWLGVPPQQRSQSVSSG 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02844 343 PRINTS Mitochondrial carrier protein signature 34 47 IPR002067 GO:0055085
Car05g02844 343 PRINTS Mitochondrial carrier protein signature 47 61 IPR002067 GO:0055085
Car05g02844 343 PRINTS Mitochondrial carrier protein signature 90 110 IPR002067 GO:0055085
Car05g02844 343 PRINTS Mitochondrial carrier protein signature 140 158 IPR002067 GO:0055085
Car05g02844 343 PRINTS Mitochondrial carrier protein signature 202 220 IPR002067 GO:0055085
Car05g02844 343 PRINTS Mitochondrial carrier protein signature 245 267 IPR002067 GO:0055085
Car05g02844 343 Gene3D Mitochondrial carrier domain 29 330 IPR023395 -
Car05g02844 343 Pfam Mitochondrial carrier protein 129 230 IPR018108 -
Car05g02844 343 Pfam Mitochondrial carrier protein 236 329 IPR018108 -
Car05g02844 343 Pfam Mitochondrial carrier protein 31 119 IPR018108 -
Car05g02844 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 236 328 IPR018108 -
Car05g02844 343 PANTHER SOLUTE CARRIER FAMILY 25 8 337 - -
Car05g02844 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 125 229 IPR018108 -
Car05g02844 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 29 115 IPR018108 -
Car05g02844 343 PANTHER GRAVES DISEASE MITOCHONDRIAL SOLUTE CARRIER PROTEIN-LIKE 8 337 - -
Car05g02844 343 SUPERFAMILY Mitochondrial carrier 32 324 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02844 Car-Chr5 73477261 73481444 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02844 113 341 Organic Solute Cotransporters AT4G26180 27.197 4.35e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02844 - - gmx:100784421 578.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02844 05 73477261 73481444 Car05g02844 05 73477261 73481444 ECH