Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02840 ATGATCACTAACTCTAACTCATCTTTATCCATGGACCTCGACGAGTCTACCGAAACCCGAATCCAACGCCTCATATCCGAAAACCCCGTCATCATCTTCACCCGATCCTCCTGCTGCATGTGCCACGTCATGAAGAATCTACTCTCCACCATCGGAGTTCACCCAACCGTCATCCAATTGGATGACCACGAGATCCCCGCTCTCCCTACCCACGATTATCTTACTCATCTCGCTCCGGCTGCTTTCATCGGCGGGATCTGCATCGGCGGCTTGGAGTCCCTCGTTGCCCTCCACGTCACCGGTCACCTTGTTCCCAAACTCGTTCAAGTTGGTGCTCTCTGGATATGA 348 0.5316 MITNSNSSLSMDLDESTETRIQRLISENPVIIFTRSSCCMCHVMKNLLSTIGVHPTVIQLDDHEIPALPTHDYLTHLAPAAFIGGICIGGLESLVALHVTGHLVPKLVQVGALWI 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02840 115 Gene3D Glutaredoxin 11 114 - -
Car05g02840 115 Pfam Glutaredoxin 30 69 IPR002109 -
Car05g02840 115 SUPERFAMILY Thioredoxin-like 18 114 IPR036249 -
Car05g02840 115 ProSiteProfiles Glutaredoxin domain profile. 18 114 - -
Car05g02840 115 PANTHER GLUTAREDOXIN-C6 4 114 - -
Car05g02840 115 CDD GRX_GRXh_1_2_like 29 106 - -
Car05g02840 115 TIGRFAM GlrX-like_plant: glutaredoxin-like family 21 115 IPR011905 -
Car05g02840 115 PANTHER GLUTAREDOXIN 4 114 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02840 Car-Chr5 73449313 73450464 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02840 20 115 Miscellaneous Gene Families AT4G15660 39.000 4.77e-22 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02840 - K03676 gmx:100791969 183.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03292 04 61437378 61438497 Car05g02840 05 73449313 73450464 PCT