Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02831 ATGGCTGCGTTTCTCACTCGAACATCCTCACGTTTCTCTCATCTACCATCACCACATCGCGTAGTTTCTCTCCACACAACCCTCCCTTCTCTATCTACACCTACACCTTATGCTCCACCTCCTCCCCCATCGGCTACCTCTCCCGTCAGCGTTTCGAAAACGGCTGAGTACGTTATCTCGAAGGTCGACGATCTCATGAATTGGGCTCGTCGTGGTTCTATCTGGCCCTTGACCTTTGGACTCGCTTGCTGTGCTGTAGAAATGATGCATACTGGTGGTGCTCGTTACGATATGGATCGATTTGGTATCATTTTTAGGCCTAGTCCTCGTCAATCTGATTGTATGATTGTTGCTGGTACTCTCACCAATAAGATGGCACCCGCTCTTCGCAAGGTTTATGACCAAATGCCCGAGCCTAGATGGGTTGTCTCCATGGGAAGTTGTGCTAACGGAGGAGGATACTACCACTACTCTTACTCTGTTGTCCGGGGATGTGACAGGATAGTTCCTGTTGATATTTATGTTCCAGGCTGTCCTCCAACTGCTGAGGCTTTACTGTATGGACTCCTCCAACTGCAGAAGAAGATCAATAGGCGCAAGGACTTCCTCCATTGGTGGACACAGTGA 627 0.4928 MAAFLTRTSSRFSHLPSPHRVVSLHTTLPSLSTPTPYAPPPPPSATSPVSVSKTAEYVISKVDDLMNWARRGSIWPLTFGLACCAVEMMHTGGARYDMDRFGIIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKINRRKDFLHWWTQ 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02831 208 PANTHER NADH DEHYDROGENASE 3 208 - -
Car05g02831 208 Pfam NADH ubiquinone oxidoreductase, 20 Kd subunit 83 192 IPR006137 GO:0051536
Car05g02831 208 ProSitePatterns Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 164 180 IPR006138 GO:0008137|GO:0048038|GO:0051539
Car05g02831 208 PANTHER NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 7, MITOCHONDRIAL 3 208 - -
Car05g02831 208 Gene3D - 54 208 - -
Car05g02831 208 SUPERFAMILY HydA/Nqo6-like 56 200 - -
Car05g02831 208 TIGRFAM nuoB_fam: NADH-quinone oxidoreductase, B subunit 58 198 IPR006138 GO:0008137|GO:0048038|GO:0051539
Car05g02831 208 Hamap NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 47 197 IPR006138 GO:0008137|GO:0048038|GO:0051539
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02831 Car-Chr5 73378019 73381193 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02831 K03940 - gmx:100802267 338.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02831 05 73378019 73381193 Car05g02831 05 73378019 73381193 ECH