Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02818 ATGATTCAAAGAACTGTCCCGAGTTTAAGGAAATTGCTTCTTCGACCGCCTGGTTATCTTTCTTCATCCAAGATAGGAACTTACCAAAGCTATGCATCTCAGCCCTCATCTCTTCAAATTCCGGACTCAACTTACAGTGATCTTGATGAGTATGCTAACGTGGACTGGGACAACCTTGGTTTTGGACTCATGCCAACCGATTTCATGTACGTTACTAAATGCTCGACGGGCCAAAATTTTGGACATGGACAGCTCGATAGGTATGGGAACATTGAACTCAGTCCATCAGCTGGGGTCCTAAATTATGGCCAGGGATTATTCGAAGGAACGAAAGCATACAGAAAGGAAAACGGGAAGCTGCTTCTATTTCGTCCGGAAGAAAATGCAATTCGCATGAAGATTGGCGCGGAAAGAATGTGCATGATATCCCCTTCCATTCATCAATTTGTTGATGCTCTTAAGCGAACTGCTCTCGCAAATAAACGTTGGGTACCTTACTTCCCATGCTCTATACATACATTCTTTTCTATTTTTTCACTTTTAACTATTAATTGCATCCAGGTCCCTCCACCTGGTAAAGGCTCCTTGTACCTTAGGCCTCTTCTCATAGGAACTGGCCCTGTTCTTGGATTGGCCCCTTCACCTGAATACACTTTTCTCATATATGCTTCCCCCGTTCGTAACTATTTCAAGGAGGGTTCTGCACCGCTTAATTTGTACGTCGAAGAGGATTTTGATCGTGCTTCTACTCGCGGCACTGGAAGCGTTAAAACCATTTCTAATTATGCACCGGTCTTGATGGCACAAACTAGAGCCAAGAGCAGAGGATTTTCAGATGTGTTATACCTTGATTCAGTCAACAAGAAAAATTTGGAGGAAGTCTCTTCTTGTAACATTTTTATTGCTAAGGGAAAAATAATTTCAACACCTGCTATCAATGGAACCATACTTTCTGGCATCACTAGAAAAAGTGTCATTGAACTTGCCAGTGATCTTGGTTATCTGGTATTGTTATATCTTTTTGGCTACTATATGATATTGGACATAATAAGATTCTTGCATTTTGCCGATGAAGTTTTTTGTACAGGAACTGCTGTTGGTGTTGCTCCTGTAGGGAGTATCACGTATCAAAATAGAAGGGTCGACTATAAAACAGATTCTGGAACTATTTGTCAAGAGTTGAACAATACCATTTTAGGAATACAAACGGGTACTATTGAAGATAAGAAAGGATCAAAGATGCTATGTGGAAATAGCAAAAGCAAACCCGGACTGTGCAATTTTTATCAGAAAGCTTGCTTGTTCTCTCCTTCCATGTGGAATATAACCCGACCCAATCAAGCCTTTGATTTGTGCTGA 1359 0.4099 MIQRTVPSLRKLLLRPPGYLSSSKIGTYQSYASQPSSLQIPDSTYSDLDEYANVDWDNLGFGLMPTDFMYVTKCSTGQNFGHGQLDRYGNIELSPSAGVLNYGQGLFEGTKAYRKENGKLLLFRPEENAIRMKIGAERMCMISPSIHQFVDALKRTALANKRWVPYFPCSIHTFFSIFSLLTINCIQVPPPGKGSLYLRPLLIGTGPVLGLAPSPEYTFLIYASPVRNYFKEGSAPLNLYVEEDFDRASTRGTGSVKTISNYAPVLMAQTRAKSRGFSDVLYLDSVNKKNLEEVSSCNIFIAKGKIISTPAINGTILSGITRKSVIELASDLGYLVLLYLFGYYMILDIIRFLHFADEVFCTGTAVGVAPVGSITYQNRRVDYKTDSGTICQELNNTILGIQTGTIEDKKGSKMLCGNSKSKPGLCNFYQKACLFSPSMWNITRPNQAFDLC 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02818 452 PANTHER AMINO ACID AMINOTRANSFERASE 21 165 IPR005786 GO:0004084|GO:0009081
Car05g02818 452 PANTHER AMINO ACID AMINOTRANSFERASE 184 411 IPR005786 GO:0004084|GO:0009081
Car05g02818 452 Gene3D - 28 237 IPR043131 -
Car05g02818 452 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 49 411 IPR036038 GO:0003824
Car05g02818 452 CDD BCAT_beta_family 92 404 IPR033939 GO:0004084|GO:0009081
Car05g02818 452 ProSitePatterns Aminotransferases class-IV signature. 293 322 IPR018300 GO:0003824
Car05g02818 452 PIRSF BCAT1 171 414 IPR005786 GO:0004084|GO:0009081
Car05g02818 452 PIRSF BCAT1 33 172 IPR005786 GO:0004084|GO:0009081
Car05g02818 452 Pfam Amino-transferase class IV 105 374 IPR001544 GO:0003824
Car05g02818 452 Gene3D - 238 413 IPR043132 -
Car05g02818 452 PANTHER BRANCHED-CHAIN-AMINO-ACID AMINOTRANSFERASE 21 165 - -
Car05g02818 452 PANTHER BRANCHED-CHAIN-AMINO-ACID AMINOTRANSFERASE 184 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02818 Car-Chr5 73248424 73256086 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02818 K00826 - gmx:100782644 570.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02818 05 73248424 73256086 Car05g02818 05 73248424 73256086 ECH