Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02806 ATGTCAACATGGCTTGCTCGTTCCCTTGCAAACTCTCTCCTTCTCGATGGTGACGGAAACAATGAAAATGATATCGTAACCGAATCTCCAACTACCTCACCTAAAAACTACCATCAAGATAATGCACTTGGATCACAATTTGAACAAGAAGAAGAAAAACGACATCATCATGATGAAACGCAAGGTCGTGGTGTTAAAGAGGATTTAGATGAAATCAAACAAACCCTAACTCGCCAATTTTGGGGAATGGCTTCCTTTCTCGCTCCTCCCCCAACAATTTCTCAATCCGATCACTCTGTTTCACAATCCGATTCTGAACAACAAGAACAAGTGGATGATGTTGTGATTTCGAATCAATCTTTTGACGTGGAACAAATTGCGCTCCATGGGGATGATCCTGAACCGAATTCGGTTTCAATCGGATCCGAATCGGAAGGAGACAGGGAACCGGAGTTTGATTTCCAATGCGCGGTTGGAATTACGGAAGAGGTGTTGACATTTGCCATGAATATCGCTATGCATCCCGAAACGTGGTTAGATTTTCCCATTGACGAGGAAGATGACACCGAAGATTTTGACATGTCCGATGCCCAGCGAGATCATGCTTTGGTTGTTGAAAGACTCGCTCCAAGATTAGCTGCGCTCAGAATTGAACTGTGCCCTTTCCATATGAGCGAAAGTTACTTCTGGCAAGTCTATTTTGTACTTTTGCATTCAAGGCTTAATAAACAAGATTCAGAGGTTTTGTCTACACCCCAGGTCATGGCAGCCAGAGCAATGTGGATGCAGGAATTGCAGAAACAAACAAAGCCAGAATTTGAATATTTCGGAAGAAGGACTCATTCCTCGCAAGACAATGCTCAGAATGATGATTTTACTCCTAGCTTATTAGATGACACCTATTCTGATGACATGCCTCATCGGACATACGGATATAGAACAACAACTTTGTCTGTGATGGCAGATAACAAGTCTGAGAAGTACACAGTTGAAAGTTTTGGATCACATTTCTCTGACAAGTCAGTTATTGAGGAAAATCCAATTATTAAAACTGAAAACAAAGATCTAAAAAGTGGTCGGCCATCTCAAATTATAATTGACTATGGTGAAGACGGCGACGATGATTGGCCAGAGGATGATTCTGATTTAGGGGGATATGGTGGAATAACACTCCCTATTGTGAATGAAGAAGACATATCGTTCAGTGATCTCGAAGATGATGACTATGGTATTAAACATGTTAGTACCAATTCAGGTTCAAAGGTTGAATAA 1272 0.4135 MSTWLARSLANSLLLDGDGNNENDIVTESPTTSPKNYHQDNALGSQFEQEEEKRHHHDETQGRGVKEDLDEIKQTLTRQFWGMASFLAPPPTISQSDHSVSQSDSEQQEQVDDVVISNQSFDVEQIALHGDDPEPNSVSIGSESEGDREPEFDFQCAVGITEEVLTFAMNIAMHPETWLDFPIDEEDDTEDFDMSDAQRDHALVVERLAPRLAALRIELCPFHMSESYFWQVYFVLLHSRLNKQDSEVLSTPQVMAARAMWMQELQKQTKPEFEYFGRRTHSSQDNAQNDDFTPSLLDDTYSDDMPHRTYGYRTTTLSVMADNKSEKYTVESFGSHFSDKSVIEENPIIKTENKDLKSGRPSQIIIDYGEDGDDDWPEDDSDLGGYGGITLPIVNEEDISFSDLEDDDYGIKHVSTNSGSKVE 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02806 423 Pfam BSD domain 189 245 IPR005607 -
Car05g02806 423 MobiDBLite consensus disorder prediction 14 68 - -
Car05g02806 423 SMART wurzfinal6 189 241 IPR005607 -
Car05g02806 423 MobiDBLite consensus disorder prediction 89 111 - -
Car05g02806 423 PANTHER BSD DOMAIN-CONTAINING PROTEIN 3 420 - -
Car05g02806 423 MobiDBLite consensus disorder prediction 14 44 - -
Car05g02806 423 ProSiteProfiles BSD domain profile. 189 241 IPR005607 -
Car05g02806 423 SUPERFAMILY BSD domain-like 159 245 IPR035925 -
Car05g02806 423 Gene3D BSD domain 157 251 IPR035925 -
Car05g02806 423 MobiDBLite consensus disorder prediction 87 111 - -
Car05g02806 423 PANTHER BSD DOMAIN-CONTAINING PROTEIN 3 420 - -
Car05g02806 423 MobiDBLite consensus disorder prediction 45 68 - -
Car05g02806 423 MobiDBLite consensus disorder prediction 369 388 - -
Car05g02806 423 MobiDBLite consensus disorder prediction 127 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02806 Car-Chr5 73106633 73111145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02806 156 239 EF-hand Containing Proteins AT1G69030 30.851 1.17e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02806 - - gmx:100794286 534.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02806 05 73106633 73111145 Car05g02806 05 73106633 73111145 ECH