Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02786 ATGGACCCATCTATAGTGAAGCTTCTTGAAGATGATGAGGATGAAACTATGCATTCAGGGGCAGACGTGGAAGCGTTCCAAGCTGCATTGAATAGAGACATAGGAGGAGATGCTTCTAATTCTCAGCTTTCTGATCTGGATGCAGGAAGCAATAATTCATTCAGTCAATCATTACCACCGTGGCCAACTTCTGTCCATGACAACCAGTCCGACTGTCAAAATCAGGAGCCTGAAATTGCACAACAGCAAGAGCAACCTTCATCTGACATGGAGCTGAAGCAACAAGGACCTGTCGTGGAACAAATACAGAATGTTGCATCACAGGAGGCAAGTAATCTTCCTTTATCACATAAACAATCTCAAGATGAATGTCTCCAAGGTCAATCTGTGCCTGCTTCCCACCAAAATTCTCAAACAAATGTAGTTCCGAAATCTGAAAAAGATCCCGTCTTTAACCATGAAACAATCAAAACAAATAGTCCTAACTGTGAATCTCAGTATGCAAAGCTGCAGCAGATGAGTAACCAACAAGCCACAGTCAATGAACAACCTAGTAGCCAAATCAATCGTAGTAAACAGGTGCCATTTGGTCTTTTGCTCCCTATCTTGATTCCCCAACTTGCCAAAGACAGAGCTATGCAACTTCAAACTTTATTTAACAAATTGAAGAGAGATGAAATACCCAAAGATCATTTTGTACGGCTTATGAAAGGCATTGTGGGGGATCAGATGCTTAGAATAGCATTAACAAAAGTGCAACAACAGACAAGAAGCAACCCAAGTTCTTCTGGACAGCAGCACCCTGTAAGGATGCCAACTGTTACTTCCAGTGCCACAAAATTGAATGATCCCCATGCATTAGCACAGCTGCATCAGAGAAGTATGAATGCTGCTGCAGACCATTCTCATACCTCTTCAGCTGTACAAGTGAAGAGTGAGCCGACCTATTCAACTACGGACATTAGTGCTAAAAAAGCTCAGGAACAGGATGTTCGAGTAGTGCAGCCAAATCAATTACCATTGTCTAGTTCTAATGCTGTTAGTCAAGAAATTGATAGATCATCAGTTCACTTACAAGGACTTAATAAGCAGCAACAACAACATATACATTTCCCAGGGACATATGGAAGTAGTGGTGGTAGTTATagccctttttctgggacaaccactggatcatcatcatctctcagatcacaatCTCATCCTCCTGATTCACACATAAGGCAAATTCCACATCAGAGCACTGGTCTAAATCCCTTAGGTGTAGAACGGCATAGTTCTTTCAATGATCCCAAGAGAATGCCAGGTGGATCTGTATCGACTGTGGTAAACAATACAACTTCACAACAAACTTCAAATTCTTGGCAACCATCAGTAGAACAAAATTCGGGCTTGTTTTCATCTGTTTCACATGTAAAAAAGGAACCTAATGACCTTTCTATTGAGCAGCAACATAGGCATCATTTATCTAAATTACATGGGTTGCCTTCTGTTAATTCTGCACAAACTGAACATGGTAGTGGTGTCAATCAAGGCACTGTAAAGGATGAGTTTTCAAGAGGTTCTTTAGCATCCAATAGCACGCCCCATACGACATCTGGTAGCTTGCCTGCGCCAAATTCTGCTCCCTCTTCTGCATCTCAACTAGATCCAACTGTCACTTTAAGCTCTCAGATCCCATCTAGCACTTTGGGTCTTATGACAAAGACACCACTAAAGAAACCTCCTCTTGGCCAGAAGAAGCCACTTGAAGCACTTGGTTCTTCACCTCCTCCTCCGAGTAAGAAACAAAAGGTGTCTGGGGCATCAATGGAACAAAGCATTGATCAGCTTAATGATGTTACGGCTGTTAGTGGTGTTGATCTTAGGGAGGAGGAAGAACAGTTATTTTCTGGGGCCAAGGAGGACAGTCGAGTTTCAGAAGCATCTCGAAGAGTTGTGCAAGAGGAGGAGGAAAGTCTGATTTTGCAGAAAGCTCCATTGCAGAGAAAATTGATTGAGATTATGACCGAGTGTGGCTTGAAGGGCATGAGTAATGATGTGGAAAGATGCTTGTCACTGTGTGTAGAGGAGAGAATACGTGGAGTAATAAGTAACATAATTAGAATGTCAAAGCAGCGGGTTGATATTGAGAAAACAAGACATCGGACTGCTGTCACTTCAGATGTTCGACAGCAAATCATGGCAATGAATAAGAAAGCAAGGGAAGAGTGGGAGAAAAAGCAGGCTGAAGCAGAGAAGCTCCGGAAACCGAGTGATGTAGATGGTAGTTCCGGAGTTGATGGTGACAAGGAGAAAGATGAAGGTCGCAATAAAGCAACAAAGGTGAACAAGGAAGTAGATGACAAGATGAGGACTAATGCTGCAAATGTTGCGGCTCGAGCTGCTGTTGGGGGACCTGACATGCTGTCTAAGTGGCAACTTATGGCCGAGCAAGCCAGGCAGAAACGTGAAGGGGGGATGGATGCTGTATCTGATTCTCAGCCAACTAAAGACGTGAATCGCAAATCTCCATCACCAGGAAGGAGCACAAAAGATAATCAAGAAAGGGAGAGAAAAGGTCCAACTTCTCATGGGAATTCAGCCGCTGCTAGGAAATTTGGGAAAAACCATTCCCCTGGATCTCAAACTCGCGTAGCTCGTAGCATCTCTGTGAAGGATGTGATTGCCGTCTTGGAGAGGGAACCTCAGATGTCCAAATCATCACTCTTATATCAATTGTATGAGAGAATTCATGCTGATGCTTCCAATGAATAA 2757 0.4233 MDPSIVKLLEDDEDETMHSGADVEAFQAALNRDIGGDASNSQLSDLDAGSNNSFSQSLPPWPTSVHDNQSDCQNQEPEIAQQQEQPSSDMELKQQGPVVEQIQNVASQEASNLPLSHKQSQDECLQGQSVPASHQNSQTNVVPKSEKDPVFNHETIKTNSPNCESQYAKLQQMSNQQATVNEQPSSQINRSKQVPFGLLLPILIPQLAKDRAMQLQTLFNKLKRDEIPKDHFVRLMKGIVGDQMLRIALTKVQQQTRSNPSSSGQQHPVRMPTVTSSATKLNDPHALAQLHQRSMNAAADHSHTSSAVQVKSEPTYSTTDISAKKAQEQDVRVVQPNQLPLSSSNAVSQEIDRSSVHLQGLNKQQQQHIHFPGTYGSSGGSYSPFSGTTTGSSSSLRSQSHPPDSHIRQIPHQSTGLNPLGVERHSSFNDPKRMPGGSVSTVVNNTTSQQTSNSWQPSVEQNSGLFSSVSHVKKEPNDLSIEQQHRHHLSKLHGLPSVNSAQTEHGSGVNQGTVKDEFSRGSLASNSTPHTTSGSLPAPNSAPSSASQLDPTVTLSSQIPSSTLGLMTKTPLKKPPLGQKKPLEALGSSPPPPSKKQKVSGASMEQSIDQLNDVTAVSGVDLREEEEQLFSGAKEDSRVSEASRRVVQEEEESLILQKAPLQRKLIEIMTECGLKGMSNDVERCLSLCVEERIRGVISNIIRMSKQRVDIEKTRHRTAVTSDVRQQIMAMNKKAREEWEKKQAEAEKLRKPSDVDGSSGVDGDKEKDEGRNKATKVNKEVDDKMRTNAANVAARAAVGGPDMLSKWQLMAEQARQKREGGMDAVSDSQPTKDVNRKSPSPGRSTKDNQERERKGPTSHGNSAAARKFGKNHSPGSQTRVARSISVKDVIAVLEREPQMSKSSLLYQLYERIHADASNE 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02786 918 MobiDBLite consensus disorder prediction 732 785 - -
Car05g02786 918 Pfam Transcription initiation factor TFIID component TAF4 family 611 906 IPR007900 GO:0005669|GO:0006352
Car05g02786 918 MobiDBLite consensus disorder prediction 109 145 - -
Car05g02786 918 ProSiteProfiles RST domain profile. 187 258 IPR022003 -
Car05g02786 918 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 41 346 IPR045144 GO:0005669|GO:0006352
Car05g02786 918 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 361 912 IPR045144 GO:0005669|GO:0006352
Car05g02786 918 MobiDBLite consensus disorder prediction 438 462 - -
Car05g02786 918 CDD TAF4 606 906 IPR007900 GO:0005669|GO:0006352
Car05g02786 918 MobiDBLite consensus disorder prediction 34 96 - -
Car05g02786 918 MobiDBLite consensus disorder prediction 838 856 - -
Car05g02786 918 MobiDBLite consensus disorder prediction 295 324 - -
Car05g02786 918 Gene3D Histone, subunit A 656 701 IPR009072 GO:0046982
Car05g02786 918 MobiDBLite consensus disorder prediction 251 277 - -
Car05g02786 918 MobiDBLite consensus disorder prediction 361 462 - -
Car05g02786 918 MobiDBLite consensus disorder prediction 732 786 - -
Car05g02786 918 MobiDBLite consensus disorder prediction 497 568 - -
Car05g02786 918 Pfam RCD1-SRO-TAF4 (RST) plant domain 190 254 IPR022003 -
Car05g02786 918 MobiDBLite consensus disorder prediction 497 605 - -
Car05g02786 918 PANTHER IP01149P-RELATED 361 912 - -
Car05g02786 918 PANTHER IP01149P-RELATED 41 346 - -
Car05g02786 918 MobiDBLite consensus disorder prediction 810 883 - -
Car05g02786 918 MobiDBLite consensus disorder prediction 361 422 - -
Car05g02786 918 MobiDBLite consensus disorder prediction 294 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02786 Car-Chr5 72916422 72924669 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02786 K03129 - gmx:100797127 1270.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02786 05 72916422 72924669 Car05g02786 05 72916422 72924669 ECH