Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02778 ATGTATTCACAAACGAAGAAAAAAATAGCAACCCATGATAACATTCCCAAAACTCCATACAACACCATTGATGACATAACAGAAGACTCTCCAAATACTCACCTTTGTAGCAGCCATTGTTGTTTCTTCTGCATCATGAAAGAACCAAACATAACTCTCAGAAGAACAAAAACATCAATCTACTTCAAGGAAATGCCTCTAACAGACAATCAAGAACATGTCTTAGTCCTCAGTGGACTATGGAACATCGCCATGACCCAACCCAACGATCCAGAGTTTCCTTCCCTTGGCATATTCAACTGCATGGCAAAACTTATCAACAAAGGTACAAAAAACACAACTTGGCTTCATAAAAATCAAAACATATACATACCTTATTATGCTGCTCATATTATTGGCTCTTACACAATGAATAAACAAGAGTTTGCACAAATAGCTGTTCAATCTGGTGTTATACCACCATTGTTAGAGCTTCTGAGTGGAAAAATGAGTTGGGTTGAGCAAAGAGTTTCTGTTAGAGCACTTGGTCATTTAGCAAGTTACAATAGTACTTTTAAATCAGTGGCAGAGTTTGAAACAGAGATAGTGAAATTAACCATGAACTTAGCTTCAACATGCTTAGAAAAAATCTATGTTGAATTTGTTTCAAAGAAGAGAAGAGTGGAGTATCACAGAAACTTGATGACAAGAGGTGTAGGTGATTTGGAAATGGAGAATCTAAAAGTTGAAAAATGGACTAGTCAACTTCAATGTTGGTCTATTTATCTTCTCAATTGTTTTGCTTGCAAAGATAAGTCTTTGAATTTAATATGCAAAAAGAAGTTTTTAAATGATTTATGTGATATGTGGGGTGGATTGATAAATCAAACTTCATCAGCTGGTGTTGGACTCATTAGAATCCTTTGTTATAATAACATGGGAAGGAAAAAAATTGCCGAGTCACCAAAAGTTATAAACTTTCTATGTAAACTTTCAAGATCTTGTGATGATTGGCAGTATCTTGGTATTGAGTGTCTTGTACTGCTTCTCAAGGATGTGAATACAAGGTACAAAGTTATTGATTTTGATGTTGTTTCATGTCTTGTTGATTTGATTGAACTTAGAAGCCTTGGTGATAAATTAAATGTTGGTGACACCATCATAAAAGTGCTACTTCTTGAGCATTGTAATGATTGTAAATTGAAATCCAATGGTCAAAAAGTGGTGGATTTGAAGGATAGGAGGGAAAAGGAGAGACTAATGTGTGATGAAAAATTAGAGGAAAAAAGGGTTATTGTGAGGTTGATGAAGAAACAAGGAAATCACATTTTTAGTTTGGGAAGAGTTGAAGAAGCTTTATTGAAATATTGTGAAGCATTGGATATTTGTCCATTGAGGTTTAGAAATGAAAGAATGGTGCTATATAGTAACAAAGCACAGTGTAATTTGCTACTTAAAAATGTGGATTCAGCTATAAGTGATTCAACACGTGCTCTTTGTCTCTCTAACCCAACAAACATGCATGGAAAAAGTCTTTGGAGAAGGTCACAAGCTTATGATATGAAAGGAATGGCTAAAGAGAGTCTTATGGATTGCATGATGCTTGTGAATGGTTTTGTTAAGTCAAATGATGAGAACAAGCGTGTTAAGGTTCCATATCATGTTGTTAGGATGATATGCAAACAAATGGATGCCACGTGGCTCTTTGCTACTGCTCGTTTGAAGTCAAAGGTCATACATAATGTTGTTGTGGAAAACACTTGTGATATTGAAGGGGATGAGATTGAGAATGAGAGCAAGTATGAAGAACTACCCTATGATCATAAGAAGGTGATGATGATGGAAAAGACAAGTTTCATGCCAGGCTTGTCTACCATTATGGAAGAACCTTTTGACGCGAAAGAAGGTGAAAGGAGAAAGATGGAAAGAGCAAGAAGGAGATTAAAGAGACATAGTAGAATAGCTAATTATGAAAGATAG 1959 0.3543 MYSQTKKKIATHDNIPKTPYNTIDDITEDSPNTHLCSSHCCFFCIMKEPNITLRRTKTSIYFKEMPLTDNQEHVLVLSGLWNIAMTQPNDPEFPSLGIFNCMAKLINKGTKNTTWLHKNQNIYIPYYAAHIIGSYTMNKQEFAQIAVQSGVIPPLLELLSGKMSWVEQRVSVRALGHLASYNSTFKSVAEFETEIVKLTMNLASTCLEKIYVEFVSKKRRVEYHRNLMTRGVGDLEMENLKVEKWTSQLQCWSIYLLNCFACKDKSLNLICKKKFLNDLCDMWGGLINQTSSAGVGLIRILCYNNMGRKKIAESPKVINFLCKLSRSCDDWQYLGIECLVLLLKDVNTRYKVIDFDVVSCLVDLIELRSLGDKLNVGDTIIKVLLLEHCNDCKLKSNGQKVVDLKDRREKERLMCDEKLEEKRVIVRLMKKQGNHIFSLGRVEEALLKYCEALDICPLRFRNERMVLYSNKAQCNLLLKNVDSAISDSTRALCLSNPTNMHGKSLWRRSQAYDMKGMAKESLMDCMMLVNGFVKSNDENKRVKVPYHVVRMICKQMDATWLFATARLKSKVIHNVVVENTCDIEGDEIENESKYEELPYDHKKVMMMEKTSFMPGLSTIMEEPFDAKEGERRKMERARRRLKRHSRIANYER 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02778 652 PANTHER ARM-REPEAT/TETRATRICOPEPTIDE REPEAT (TPR)-LIKE PROTEIN 19 638 - -
Car05g02778 652 Gene3D - 46 384 IPR011989 -
Car05g02778 652 SUPERFAMILY TPR-like 419 527 IPR011990 GO:0005515
Car05g02778 652 SMART arm_5 139 180 IPR000225 GO:0005515
Car05g02778 652 Gene3D Tetratricopeptide repeat domain 422 554 IPR011990 GO:0005515
Car05g02778 652 MobiDBLite consensus disorder prediction 625 652 - -
Car05g02778 652 PANTHER ARM-REPEAT/TETRATRICOPEPTIDE REPEAT (TPR)-LIKE PROTEIN 19 638 - -
Car05g02778 652 Coils Coil 627 647 - -
Car05g02778 652 SUPERFAMILY ARM repeat 77 384 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02778 Car-Chr5 72882317 72884577 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02778 - - gmx:100777591 808.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02778 05 72882317 72884577 Car05g02778 05 72882317 72884577 ECH