Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02776 ATGAAGCTTCCATTTGCATTACTCTTTCTCTGCCTTCTCCTCAGCTCCTCATTGGATATCTCATTAGCTGGTTCTACTTTCTGTGACACGAGGTGTGGTGAAAGGTGCTCCAAAGCTTCGTTTCAAGACAGATGCTTGAAGTACTGTGGGATCTGCTGTGAGAAATGTAACTGTGTGCCCTCTGGGACTTATGGGAACAAAGATGAGTGTCCTTGTTACAGAGACATGAAGAATTCAAAAGGCCAAGGAAAATGCCCTTAA 261 0.4406 MKLPFALLFLCLLLSSSLDISLAGSTFCDTRCGERCSKASFQDRCLKYCGICCEKCNCVPSGTYGNKDECPCYRDMKNSKGQGKCP 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02776 86 Pfam Gibberellin regulated protein 27 86 IPR003854 -
Car05g02776 86 PANTHER SNAKIN-1-RELATED 5 86 - -
Car05g02776 86 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 5 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02776 Car-Chr5 72872935 72874486 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02776 - - mtr:MTR_3g102660 143.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02776 05 72872935 72874486 Car04g01437 04 14646396 14647916 ECH
Car05g02776 05 72872935 72874486 Car05g02776 05 72872935 72874486 ECH
Car04g03403 04 62661907 62663276 Car05g02776 05 72872935 72874486 PCT