Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02734 ATGAATATGAAGAGAACACAATCATCACTTCTACAAATTCAGCCTCCTACGTATGGAAAGTTAGTGACAATTCTAAGCATAGATGGAGGTGGTATTAGGGGCATTATTCCAGCAACAATACTTGAATATCTTGAAACACAACTTCAAGAATTGGATGGTGAATCTGCAAGACTTGCAGATTATTTTGATGTGATTACAGGAACAAGCACAGGTGGTCTTGTAACTGCCATGTTAACTGCTCCAAATCATAACCAACGTCCACTTTTTGCTGCCAAGGATATCAAACCCTTTTATTTGGAACATTGTCCAAAGATTTTTCCACAACACAAGGACCTGTTCGGATCGGTGACAAAGTTGTTTAGATCATTAGCAGGACCAAAATATGATGGAAAATACCTTCACGATATGGTGAGAGAAAAATTAGGGGAAATTCGTGTGCACGAAACACTGACCAATATTGTGATCCCCACATTTGACATAAAGACAATGCAACCAATCATTTTCTCATCATATAAGGTGAAGACAACTCCTTGTTTTGATGCTCGTCTCTCTGATATATGCATCGGTACCTCTGCTGCACCAACTTATCTTCCTGGCTACAATTTCAAGAACCAAGATGAAGATGGCAACACACACGAATTCAATCTTATTGATGGTGGTGTTTGTGCAAATAATCCGACATTAGTTGCTGTGAATGAAGTAACGAAGCAGATAATAAATCAAAATAATGACTTCGATTCCATAAAGCCAATGGAATATAGTCGGTTCTTGATAATCTCATTGGGCACGGGAACACCAAAGAATGAACAAAAATTCGATTCAAAATTGGCAGCAAAATGGGGATTATTGGATTGGTTAACACATGGTGGTTCAACACCTTTAATCGATATGTTTAGCCAATCCTCCGGAGATATGGTTGATTACAATCTTGCTACCGTCACTCAAGCACTTAACTCTCAAGATAATTACCTCCGAATACAGGATGATACATTGACCGGGATAGACTCTTCGGTTGATATTGCAACAAAAGAGAATTTAGATAAATTGTGCCAAATTGGAGAAAGGTTATTGAAGAAACCATTATCTAATGTCAATTTAGAGACGGGTGTGTTTGAGCCTACTCAAAATAGGGAGACCAACCAAGATGCTCTCAAAAGGTTTGCCAAAATACTTTCACAAGAAAGGAGGCTCCGAGAAATAAAATCTCCTCATGTACAAACAAGGCCTTAA 1230 0.3829 MNMKRTQSSLLQIQPPTYGKLVTILSIDGGGIRGIIPATILEYLETQLQELDGESARLADYFDVITGTSTGGLVTAMLTAPNHNQRPLFAAKDIKPFYLEHCPKIFPQHKDLFGSVTKLFRSLAGPKYDGKYLHDMVREKLGEIRVHETLTNIVIPTFDIKTMQPIIFSSYKVKTTPCFDARLSDICIGTSAAPTYLPGYNFKNQDEDGNTHEFNLIDGGVCANNPTLVAVNEVTKQIINQNNDFDSIKPMEYSRFLIISLGTGTPKNEQKFDSKLAAKWGLLDWLTHGGSTPLIDMFSQSSGDMVDYNLATVTQALNSQDNYLRIQDDTLTGIDSSVDIATKENLDKLCQIGERLLKKPLSNVNLETGVFEPTQNRETNQDALKRFAKILSQERRLREIKSPHVQTRP 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02734 409 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 25 231 IPR002641 GO:0006629
Car05g02734 409 SUPERFAMILY FabD/lysophospholipase-like 21 382 IPR016035 -
Car05g02734 409 PANTHER XYLOSE ISOMERASE 3 406 - -
Car05g02734 409 PANTHER PATATIN 3 406 - -
Car05g02734 409 Gene3D Cytosolic phospholipase A2 catalytic domain 12 403 - -
Car05g02734 409 CDD Pat17_isozyme_like 19 369 - -
Car05g02734 409 Pfam Patatin-like phospholipase 25 230 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02734 Car-Chr5 72428389 72430270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02734 1 407 Miscellaneous Gene Families AT2G26560 61.916 0.0 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02734 - - gmx:100783909 677.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02734 05 72428389 72430270 Car05g02734 05 72428389 72430270 ECH