Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car05g02721 | ATGTTTACTGATTATAAAGCCACTCTCTCCCCAGTTGATTTCATCAACAAGCCTGATGAAGTGAGAGAAGAAGTGAATATATGGGCCGCAAAACAGACAAATGACCTTATAAAAGATATTCTACCACGTGGGTCAGTTGATAGTTTAACTTATCTCATTTTCGCAAATGCATTATACTTCAAAGGAGTTTGGGATCAAAAGTTTAATGTTTCGAAAACAAAAGACTATGATTTTCACCTTCTCAATGGTAGTTCGATCAAGGTTCCCTTCATGACTAATTGGGATATGCAATATATCAGTGTTTTCGATGGGTTTAAAGTCCTTTGTCTTCCTTATAACCAAGGTAAAGATAAACGTCAATTCTCTATGTACTTTTTTCTTCCTGATGCAAAAGATGGATTGTTAGCTTTGATTGAGAAGTTAACTTATGAATCTGAGTTCCTGGAACAAAAGCTACCTTGTCGAAAAATGAAAGTAGGCGATTTCAGAATTCCAAGGTTCGAGATTTCTTTTCAACTTGAAACTCCTAGTGTGTTGAAGGAGTTCGGGGTGGTTTCACTCTTTGAAGtgatgggaaattcaacaacaaataacaataacaactctaacagcagcggataa | 621 | 0.3317 | MFTDYKATLSPVDFINKPDEVREEVNIWAAKQTNDLIKDILPRGSVDSLTYLIFANALYFKGVWDQKFNVSKTKDYDFHLLNGSSIKVPFMTNWDMQYISVFDGFKVLCLPYNQGKDKRQFSMYFFLPDAKDGLLALIEKLTYESEFLEQKLPCRKMKVGDFRIPRFEISFQLETPSVLKEFGVVSLFEVMGNSTTNNNNNSNSSG | 206 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car05g02721 | 206 | SMART | serpin2 | 1 | 206 | IPR023796 | - | |
| Car05g02721 | 206 | Gene3D | Antithrombin, subunit I, domain 2 | 1 | 62 | IPR042178 | - | |
| Car05g02721 | 206 | PANTHER | SERPIN-ZX-LIKE | 5 | 189 | - | - | |
| Car05g02721 | 206 | Pfam | Serpin (serine protease inhibitor) | 5 | 194 | IPR023796 | - | |
| Car05g02721 | 206 | SUPERFAMILY | Serpins | 4 | 193 | IPR036186 | - | |
| Car05g02721 | 206 | PANTHER | SERINE PROTEASE INHIBITOR, SERPIN | 5 | 189 | IPR000215 | GO:0004867|GO:0005615 | |
| Car05g02721 | 206 | PANTHER | SERPIN-ZX-LIKE | 5 | 192 | - | - | |
| Car05g02721 | 206 | PANTHER | SERINE PROTEASE INHIBITOR, SERPIN | 5 | 192 | IPR000215 | GO:0004867|GO:0005615 | |
| Car05g02721 | 206 | Gene3D | - | 64 | 188 | IPR042185 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Car05g02721 | Car-Chr5 | 72313200 | 72314153 | Dispersed/Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car05g02721 | K13963 | - | cam:101514476 | 389.423 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Car05g02721 | 05 | 72313200 | 72314153 | Car05g02721 | 05 | 72313200 | 72314153 | ECH |