Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02716 ATGTCTTATTCCCGTGGCCGCGATTTCTTGTTCTGTCACTTGTGTGGGACTATGCTCGCGGTTCCCTCAACTGAATATGCACAATGCCCCTTGTGCAAAACCAGGAAAAACATTAGGGATATTAAAGGGAAGGAAATAAGTTACACAATTTCTGCTGAGGATATCAGAAGAGAACTAGGAATCGATTTAATCGAAGAACAGAAGGTTCAATTGTCTAAGGTCAACAAGACATGTGAAAAATGTGGTCATGGTGAAGCTACCTTTTATACAAGACAGATGAGATCAGCAGATGAAGGGCAAACTACTTTCTACACATGCACCCGTTGTGGTCATCAGTTTCAGGAGAATTAA 351 0.4131 MSYSRGRDFLFCHLCGTMLAVPSTEYAQCPLCKTRKNIRDIKGKEISYTISAEDIRRELGIDLIEEQKVQLSKVNKTCEKCGHGEATFYTRQMRSADEGQTTFYTCTRCGHQFQEN 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02716 116 Pfam Transcription factor S-II (TFIIS) 77 114 IPR001222 GO:0003676|GO:0006351|GO:0008270
Car05g02716 116 PANTHER DNA-DIRECTED RNA POLYMERASE SUBUNIT 1 115 - -
Car05g02716 116 CDD Zn-ribbon_RPA12 73 116 IPR034004 GO:0006379
Car05g02716 116 SMART Cys4_2 76 115 IPR001222 GO:0003676|GO:0006351|GO:0008270
Car05g02716 116 PIRSF RNApol_RpoM 9 116 IPR012164 GO:0006351
Car05g02716 116 PANTHER DNA-DIRECTED RNA POLYMERASE 1 115 IPR012164 GO:0006351
Car05g02716 116 ProSitePatterns Zinc finger TFIIS-type signature. 78 113 IPR001222 GO:0003676|GO:0006351|GO:0008270
Car05g02716 116 Gene3D - 62 116 - -
Car05g02716 116 ProSiteProfiles Zinc finger TFIIS-type profile. 74 114 IPR001222 GO:0003676|GO:0006351|GO:0008270
Car05g02716 116 SUPERFAMILY Zinc beta-ribbon 59 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02716 Car-Chr5 72272100 72275369 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02716 K03000 - zju:107420403 190.274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02716 05 72272100 72275369 Car05g02716 05 72272100 72275369 ECH