Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02714 ATGGTGAATGGAAGAAGCATGACACTGACATTAACATTAACATGCTTATATAATAATCTTACCCATAATTCCACCGCATTTTCTACTCGTCCTTCTCTCCACAACCACAAACCCCTCTATCAATTCTTCTCCGGTATTCTCAAACCTACAATTCGATCATTTTCGACTACAATTACTGCTTCCGGTATAAGCAAAACCATGGGGAGTGTCGATTCTGATTCCGTAACTTACCTCAAACAGCAAGAAGCCGCTGGGATTGATGAAACTCTAATGGGTCCTCTTGGCTTCAGTGTCGACCAGCTCATGGAATTGGCTGGTTTGAGCGTTGCTACCTCCATATATGAGGTTTACAAGCCGGGTGAGTATAGTCGTGTTCTTACTGTATGTGGTCCTGGTAACAATGGTGGCGATGGTCTGGTGGCTGCCCGTCACCTACATCACTTTGGTTATAAGCCCTTGGTCTGCTACCCAAAGCGTACCCCCAAGACTCTTTATGCTGGGTTAGTTACTCAGCTTGAAGCACTGTCAATCCCTTTCTTGTCGGTGGAAGATCTACCGTCAGATTTCTCTAAGGACTTTGACATTTTAGTAGATGCTATGTTTGGATTCTCATTTCATGGTTCTCCAAGGCCTCCCTTTGATGATTTGATCCAAAGACTTGTTTCTTTAAGTAATCATAATCAAATTGGCCAAAAAAGACCCGTCATAGTCTCTGTAGATATTCCCTCTGGGTGGCATGTTGAAGAGGGAGATGTTAATGGTACAGGCATTAAACCTGATTTGTTGGTCTCTTTGACAGCACCAAAATTATGTGCAAAGAAGTTTGGCGGCCCTCACCACTTTTTAGGAGGTAGATTTGTCCCACCTGCTATTGCTGAAAAGTATAAGCTTATACTTCCACCATATCCTGGAACATCCATGTGTGTCCGAATTGGAAAGCCTCCTCAAATTGATATTTCAGCTCTACGAGAAAACTATATCTCTCCAGAATTTCATGAAGACCAGGTGGAGGCAGACCCCAATAATCAGTTTCGTAAATGGTTTGATGATGCATTGGCTGCGGGTTTGAAGGAACCAAATGCTATGGGCTTGTCAACTGTAGGGAAGGATGGAAAACCCTCGTCACGGATTGTATTGCTAAAAGGCTTGGAAAAGGACGGATTTGTGTGGTACACAAACTACGAAAGTCAAAAGGGACATGAGTTAGCTGAAAATCCACATGCATCACTTCTGTTTCATTGGGATGGTTTAAACCGGCAGGTACGTGTGCAAGGGTCTGTTCAAAAAGTTTCTGATGAGGAATCAGAGCAATATTTTCATAGCCGCCCTAGAGGAAGTCAGATTGGAGCCATAGTCAGCAAGCAGAGTACTGTAGTGCCTGGTAGGCATGTTCTTCATCAGCAGTACAAAGAGCTGGAACAAAAATATGCTGATGGAAGTTTGATTCCTAAACCTAAAAACTGGGGAGGATACAAGCTAGTGCCACATCTTTTTGAATTTTGGCAAGGACAAAAATCTCGCTTGCATGACAGGTTGCGATATGTTCCCCAAGAGATCGATGGACATAAGGTGTGGAAGATTGAGCGGTTGGCTCCCTGA 1599 0.4353 MVNGRSMTLTLTLTCLYNNLTHNSTAFSTRPSLHNHKPLYQFFSGILKPTIRSFSTTITASGISKTMGSVDSDSVTYLKQQEAAGIDETLMGPLGFSVDQLMELAGLSVATSIYEVYKPGEYSRVLTVCGPGNNGGDGLVAARHLHHFGYKPLVCYPKRTPKTLYAGLVTQLEALSIPFLSVEDLPSDFSKDFDILVDAMFGFSFHGSPRPPFDDLIQRLVSLSNHNQIGQKRPVIVSVDIPSGWHVEEGDVNGTGIKPDLLVSLTAPKLCAKKFGGPHHFLGGRFVPPAIAEKYKLILPPYPGTSMCVRIGKPPQIDISALRENYISPEFHEDQVEADPNNQFRKWFDDALAAGLKEPNAMGLSTVGKDGKPSSRIVLLKGLEKDGFVWYTNYESQKGHELAENPHASLLFHWDGLNRQVRVQGSVQKVSDEESEQYFHSRPRGSQIGAIVSKQSTVVPGRHVLHQQYKELEQKYADGSLIPKPKNWGGYKLVPHLFEFWQGQKSRLHDRLRYVPQEIDGHKVWKIERLAP 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02714 532 TIGRFAM yjeF_nterm: YjeF family N-terminal domain 81 274 IPR004443 -
Car05g02714 532 Gene3D - 325 523 IPR012349 -
Car05g02714 532 ProSitePatterns Pyridoxamine 5'-phosphate oxidase signature. 498 511 IPR019740 GO:0016638
Car05g02714 532 Gene3D - 73 311 IPR036652 -
Car05g02714 532 Pfam YjeF-related protein N-terminus 99 271 IPR004443 -
Car05g02714 532 Pfam Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 488 532 IPR019576 -
Car05g02714 532 TIGRFAM pdxH: pyridoxamine 5'-phosphate oxidase 315 532 IPR000659 GO:0004733|GO:0008615|GO:0010181
Car05g02714 532 PANTHER NAD(P)H-HYDRATE EPIMERASE 71 517 IPR032976 -
Car05g02714 532 Hamap NAD(P)H-hydrate epimerase [nnrE]. 79 314 IPR004443 -
Car05g02714 532 Hamap Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 325 532 IPR000659 GO:0004733|GO:0008615|GO:0010181
Car05g02714 532 ProSiteProfiles YjeF N-terminal domain profile. 83 299 IPR004443 -
Car05g02714 532 SUPERFAMILY YjeF N-terminal domain-like 77 306 IPR036652 -
Car05g02714 532 Pfam Pyridoxamine 5'-phosphate oxidase 348 434 IPR011576 -
Car05g02714 532 SUPERFAMILY FMN-binding split barrel 331 532 - -
Car05g02714 532 PANTHER NAD(P)H-HYDRATE EPIMERASE 71 517 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02714 K23998 - gmx:100795497 882.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02714 05 72241345 72247737 Car05g02714 05 72241345 72247737 ECH