Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02710 ATGGACTCCAATCCCTTTCTCGATGGCAACATTCACAATATTCTCGACTCTCGATTCCTTCACACTCGTCCTGATGTTAATCAGAGTTTGCAGACACACTCTTCCTTGATTCGGAGGCTTTCTCAAGATAAAGAGTTAGAGGGGCATTTTGGTTGTGTCAATGCTGTGGCTTGGAATTCAAACGGTTCATTATTGATATCCGGATCAGATGATACGCGGATCAACATTTGGAGTTATTCTGGTCAGAAACTACTGCAATCAATTGACACCGGACATTCTGCAAATATATTCTGTACTAAGTTCATACCAGAAACTTCTGATGAGCTTGTAGCCTCTGGAGCTGGAGATGCTGAAGTTCGGTTATTCAATAGGTCTCGCTTAAGTGGGAGTGGATTTAATGATAATGCCATTGCTCCATCAGCACTTTACCAATGCCACACTCGTAGAGTCAAGAAATTGGCTGTTGAAAATGGAAACCCCAATGTGGTATGGAGTGCTAGTGAGGATGGAACCTTAAGACAACATGATTTTCGGGAAGGTACCTCTTGTCCTCTGGCAGGATCTTCACACCAAGAATGTCACAATGTTCTACTTGATTTACGGAATGGAGCTAAACGGTCCCTTGGCGATCCTCCTAAACAAGTCCTTGCTTTAAAATCTTGTGACATTAGTTCAGCTAGACCTCATTTGCTCCTTGTTGGTGGGAGTGATGCCTTTGCACGTCTGTATGATAGAAGGATGCTACCACCTTTAAGCTCCTGTGGGAAAAGAATGCCTCCACCTCCTTGTGTTAATTATTTCTGTCCAATGCATCTTTCTGATCGTGGACATCCAAGCTTGCACTTAACTCATGTTGCGTTTAGTCCTGATGGATGCGAAGTTCTCCTCAGCTATAGTGGAGAGCATGTTTACTTGATGAATGTAAATCATGCTGGAGTGAATGAGATGCAATATACTTCAGGAGATGTTTCAAAGCTGACGACTTACTCTCCAATAGTTAATGGGGCAGAATTGCAGCCTTTTGTGTCTAATGTCTTCCCAAATGGTTTTCCTACTAAAAAGAACATTGCTGCAAAGCTTGACAAGTGTAGGAAACTAATAAAATATGCTAAGAAGTCATTGGAGGAGGGGACACCCTATTATGGAATTGAGGCATGCAATGAAGTTTTGAATGGCTACAATCATATTATTGGGCCTGCACTAAAACATGAATGCTTGTGTACACGTGCTGCACTATTGCTCAAGAGGAAGTGGAAAAACGATGCTCATATGGCTACAAGGGACTGCCATGCTGCTAGGAAAATCGATAAATCTGCATATAAACCACTTTACTACATGTCAGAAGCATTGTCTCAGTTGGGTAGACACAAAGAAGCTTTGGAATTCGCTGTTGCTTCCCACTCGCTGGCCCCATCCAAAGCTGAAGTTGCTGAAAGAGTGGCAAATGTGAAGAAGGATATTGTTTTAGCTGAAACTGAGAAAAATAGTAAGACAAATAATGTAGCGTCAAGGATTGACGGAAGAGGTGGAAGAATATTATCATTAAGTGACATACTCTACCGATCAGAGGCTAATAGTGATTCTTCACAAGATGATCAGAGATCTGAGAGGGATGATTCTGATTACGATGAGGAATTGGAGTTGGACTTTGAAACATCGGTATCTGGCGACGAAGGACATGATTCTGATTCAAATATTCTTCATGAGAGTTTGAATCTTAGAATTCATCGCAGAGGCGACTCGAGAGAAAATGTTGGTGCAAGTGGATCGTGCGAATCACCCTCATCGTCATCATCACAGAATGGCAGAGCATCATATCAGGTTTGTTTTGATATCTTCTATAGAAAGTAG 1851 0.4187 MDSNPFLDGNIHNILDSRFLHTRPDVNQSLQTHSSLIRRLSQDKELEGHFGCVNAVAWNSNGSLLISGSDDTRINIWSYSGQKLLQSIDTGHSANIFCTKFIPETSDELVASGAGDAEVRLFNRSRLSGSGFNDNAIAPSALYQCHTRRVKKLAVENGNPNVVWSASEDGTLRQHDFREGTSCPLAGSSHQECHNVLLDLRNGAKRSLGDPPKQVLALKSCDISSARPHLLLVGGSDAFARLYDRRMLPPLSSCGKRMPPPPCVNYFCPMHLSDRGHPSLHLTHVAFSPDGCEVLLSYSGEHVYLMNVNHAGVNEMQYTSGDVSKLTTYSPIVNGAELQPFVSNVFPNGFPTKKNIAAKLDKCRKLIKYAKKSLEEGTPYYGIEACNEVLNGYNHIIGPALKHECLCTRAALLLKRKWKNDAHMATRDCHAARKIDKSAYKPLYYMSEALSQLGRHKEALEFAVASHSLAPSKAEVAERVANVKKDIVLAETEKNSKTNNVASRIDGRGGRILSLSDILYRSEANSDSSQDDQRSERDDSDYDEELELDFETSVSGDEGHDSDSNILHESLNLRIHRRGDSRENVGASGSCESPSSSSSQNGRASYQVCFDIFYRK 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02710 616 Pfam WD domain, G-beta repeat 44 78 IPR001680 GO:0005515
Car05g02710 616 Gene3D Tetratricopeptide repeat domain 352 487 IPR011990 GO:0005515
Car05g02710 616 MobiDBLite consensus disorder prediction 572 603 - -
Car05g02710 616 SUPERFAMILY WD40 repeat-like 42 310 IPR036322 GO:0005515
Car05g02710 616 Gene3D - 28 130 IPR015943 GO:0005515
Car05g02710 616 MobiDBLite consensus disorder prediction 586 603 - -
Car05g02710 616 PANTHER WD AND TETRATRICOPEPTIDE REPEATS PROTEIN 1 21 569 - -
Car05g02710 616 SUPERFAMILY TPR-like 401 483 IPR011990 GO:0005515
Car05g02710 616 MobiDBLite consensus disorder prediction 523 543 - -
Car05g02710 616 PANTHER WD REPEAT DOMAIN-CONTAINING FAMILY 21 569 IPR045151 -
Car05g02710 616 SMART WD40_4 39 78 IPR001680 GO:0005515
Car05g02710 616 SMART WD40_4 81 123 IPR001680 GO:0005515
Car05g02710 616 SMART WD40_4 265 307 IPR001680 GO:0005515
Car05g02710 616 SMART WD40_4 211 244 IPR001680 GO:0005515
Car05g02710 616 SMART WD40_4 136 176 IPR001680 GO:0005515
Car05g02710 616 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 46 78 - -
Car05g02710 616 Gene3D - 131 325 IPR015943 GO:0005515
Car05g02710 616 ProSiteProfiles Trp-Asp (WD) repeats profile. 46 87 IPR001680 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02710 K11807 - gmx:100820036 1004.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02710 05 72199265 72210093 Car05g02710 05 72199265 72210093 ECH