Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02702 ATGGGTGTTAAGGGTTTTCTAGAAGGTGGCATTGCTTCCATTGTTGCAGGAAGCACAACTCACCCACTCGACCTCATCAAAGTTCGCATGCAACTTCAAGGCGAGACCCTCCCACTTTCACACAATCTTCGTCCCGCTTTTGCTTTTCACTCTTCACACCCCTCAATACTTCCAACTACACCCCCCTCCGTCTCAGGACCTATCTCCCTCGGCCTCCGTATTGTTCAATCCGAAGGCGTCTCCGCTCTTTTCTCCGGCGTCTCCGCCACCGTCCTCCGTCAAACTCTCTATTCCACCACCCGCATGGGTCTCTACGACCTCCTCAAACAAAACTGGACCGATCCCGATGTAGGAACAATGCCTGTGTCAAAAAAGATAACGGCGGGTTTAATCGCCGGCGGGATTGGCGCCGCCGTAGGAAACCCTGCTGACGTGGCGATGGTTCGTATGCAAGCCGATGGTCGACTTCCGGTGACTGAACGACGGAATTACAAAAGCGTATTCGACGCGATTAAGAGAATGTCGAATCAGGAAGGGATTGGTTCTCTGTGGCGCGAGACGATTGTGGAGAAAGGGTGGATGAAGGATGGATTTGGGACCCACGTGTCAGCGAGTTTTGCGGCGGGTTTCGTGGCGGCAGTTGCTTCGAACCCTATTGATGTGATAAAGACTAGGGTTATGAGTATGAAGGTGGAATCTGGTGGTGAGACTCCACCTTATAATGGTGCACTTGATTGTGCGATTAAGACTGTTCGTGCTGAAGGACCTATGGCTCTTTACAAGGGTTTTATTCCTACAATTTCAAGGCAGGGTCCTTTTACTGTTGTTCTTTTTGTCACGCTTGAACAAGTTAGAAAGCTGCTCAAGGATTTTTGA 876 0.5034 MGVKGFLEGGIASIVAGSTTHPLDLIKVRMQLQGETLPLSHNLRPAFAFHSSHPSILPTTPPSVSGPISLGLRIVQSEGVSALFSGVSATVLRQTLYSTTRMGLYDLLKQNWTDPDVGTMPVSKKITAGLIAGGIGAAVGNPADVAMVRMQADGRLPVTERRNYKSVFDAIKRMSNQEGIGSLWRETIVEKGWMKDGFGTHVSASFAAGFVAAVASNPIDVIKTRVMSMKVESGGETPPYNGALDCAIKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKLLKDF 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02702 291 Pfam Mitochondrial carrier protein 197 289 IPR018108 -
Car05g02702 291 Pfam Mitochondrial carrier protein 4 111 IPR018108 -
Car05g02702 291 Pfam Mitochondrial carrier protein 120 185 IPR018108 -
Car05g02702 291 ProSiteProfiles Solute carrier (Solcar) repeat profile. 196 287 IPR018108 -
Car05g02702 291 PANTHER MITOCHONDRIAL UNCOUPLING PROTEIN 5 1 186 - -
Car05g02702 291 PANTHER MITOCHONDRIAL UNCOUPLING PROTEIN 5 185 291 - -
Car05g02702 291 ProSiteProfiles Solute carrier (Solcar) repeat profile. 4 111 IPR018108 -
Car05g02702 291 Gene3D Mitochondrial carrier domain 4 187 IPR023395 -
Car05g02702 291 Gene3D Mitochondrial carrier domain 188 290 IPR023395 -
Car05g02702 291 PRINTS Mitochondrial carrier protein signature 5 18 IPR002067 GO:0055085
Car05g02702 291 PRINTS Mitochondrial carrier protein signature 18 32 IPR002067 GO:0055085
Car05g02702 291 PRINTS Mitochondrial carrier protein signature 205 227 IPR002067 GO:0055085
Car05g02702 291 SUPERFAMILY Mitochondrial carrier 4 284 IPR023395 -
Car05g02702 291 PANTHER MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED 1 186 - -
Car05g02702 291 PANTHER MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED 185 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02702 Car-Chr5 72136683 72137834 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02702 1 290 Miscellaneous Gene Families AT5G09470 55.294 2.09e-108 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02702 K15104 - vvi:100245527 421.779