Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02700 ATGAACATTAAATTGGCTACGGCCTTAATACTTTGGTCTGTAATTTACAGGAGCAAGAGCAACGCCATTGATCCATGTGCATCTCAAGCAGATGACACCGATCTCAACGTAATTCCCATCTACGGAAAATGCTCACCTTTCAACCCACCCAAAACAGACTCATGGGAAAACAGAGTCATCAACATGGCTTCCAAAGACCCAGCCCGAATGAACTACCTATCCACATTACTAGCCCAAAAAACCATCTCCTCAGCCCCAATTGCTTCGGGCCAGGCCTTCAACATTGGCAACTACGTTGTCCGTGTCAAAATCGGAACACCAGGTCAACTCTTCTTCATGGTCCTTGACACAAGCACCGACGAGGCCTTTGCCCCTTGCTCCGGTTGCATCGGCTGCTCTTCCACCACTTTTTCCCCAAATTCCTCCACCAGTTACGGCCCATTGGACTGTTCCGTTCCACAATGTGGTCAGGTCCGTGGGTTTTCATGCCCAGCTACGGGCTCAGGCGCGTGTTCTTTCAACCAAACTTACGCGGGTTCTTCTTTCTCTGCTACACTCATTCAAGATTCGCTTAGATTATCCACCGATGTTATTCCCACTTACTCTTTCGGTTGCATTAGCGCCATATCCGGTTCTTCAATTCCAGCCCAAGGACTTTTGGGCTTGGGCCGTGGCCCATTATCTTTGTTATCCCAATCCGGTTCACTTTACTCTGGTGTTTTTTCTTACTGTCTACCTAGTTTTAAATCTTATTACTTTTCCGGGTCACTTAAACTAGGACCCGTGGGTCAACCCAAGAGTATTCGGACCACACCTCTTCTACGCAATCCTCACCGTCCATCTCTTTATTATGTTAATCTTACTGGAATTAGCGTGGGGCGTGTTCATGTTCCTTTGCCATACGAGTTTCTTGCATTCGACCCGAATACTGGATCCGGAACAATAATTGACTCGGGTACGGTGATAACCCGTTTTGTGGAACCGGTTTATAATGCCGTGAGGGATGAGTTTAGGAAACAAGTGACGGGTCCGTTTTCGAGCTTGGGAGCATTCGACACGTGTTTTGTAAAGACGTATGAAACATTGGCACCGGCAATTACGTTGCGTTTTACGGATTTGAATTTGACGCTGCCAATGGAGAATAGTTTGATTCATAGCAGTTCGGGGTCGTTGGCTTGTCTTGCTATGGCTGCGGCACCAAGTAATGTGAATTCTGTGTTGAATGTCATCGCTAATTTTCAGCAACAGAATTTGAGGGTTTTGTTTGATACCGTCAATAATAAGGTTGGAATTGCCCGTGAGCTTTGTAACTAG 1314 0.465 MNIKLATALILWSVIYRSKSNAIDPCASQADDTDLNVIPIYGKCSPFNPPKTDSWENRVINMASKDPARMNYLSTLLAQKTISSAPIASGQAFNIGNYVVRVKIGTPGQLFFMVLDTSTDEAFAPCSGCIGCSSTTFSPNSSTSYGPLDCSVPQCGQVRGFSCPATGSGACSFNQTYAGSSFSATLIQDSLRLSTDVIPTYSFGCISAISGSSIPAQGLLGLGRGPLSLLSQSGSLYSGVFSYCLPSFKSYYFSGSLKLGPVGQPKSIRTTPLLRNPHRPSLYYVNLTGISVGRVHVPLPYEFLAFDPNTGSGTIIDSGTVITRFVEPVYNAVRDEFRKQVTGPFSSLGAFDTCFVKTYETLAPAITLRFTDLNLTLPMENSLIHSSSGSLACLAMAAAPSNVNSVLNVIANFQQQNLRVLFDTVNNKVGIARELCN 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02700 437 Gene3D Acid Proteases 75 260 IPR021109 -
Car05g02700 437 Gene3D Acid Proteases 261 437 IPR021109 -
Car05g02700 437 SUPERFAMILY Acid proteases 91 436 IPR021109 -
Car05g02700 437 Pfam Xylanase inhibitor N-terminal 98 260 IPR032861 -
Car05g02700 437 Pfam Xylanase inhibitor C-terminal 283 432 IPR032799 -
Car05g02700 437 PANTHER ASPARTYL PROTEASE AED3 9 437 - -
Car05g02700 437 ProSiteProfiles Peptidase family A1 domain profile. 98 432 IPR033121 -
Car05g02700 437 PANTHER ASPARTYL PROTEASE-RELATED 9 437 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02700 Car-Chr5 72120326 72122337 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02700 77 437 Miscellaneous Gene Families AT1G77480 25.622 1.93e-16 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02700 - - gmx:100788630 717.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02700 05 72120326 72122337 Car05g02700 05 72120326 72122337 ECH