Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02699 ATGCGTGTCACCGGGGATCTAGGGTTTTCGAGCCTGGTCCTTGTGGTGGTTTGTGTCGTGTTGCCAGTGATTGGCTTTGTAATTCGCCGGAAATGGAAGCTTGCGGTGGCTAGAAATGAAGAGATCAATAGGCTTTTGATTTTGGCAGCTGAGGAAACTGCTAGGGCAGAGACAGAGGCGTCCGGTGTGTACGGCACGGTGGTTCCCGCCACTTATAACTATCAATGCGCTCTCTGCTATTTTCCCGCCACTGCGCGCTGCGCTCAGTGCAAATCCGTTCGCTATTGTTCTGCTCATTGCCAAACCGTTCATTGGCGTCAAGGTCACAAATTTGAATGCCATCCTCCGAGCAAAACTCATCAAAGTGATGGTGTAATAAGTGATATTCACAAGAGGGAAGTGGTGCAAGACTACACTGGTATTCGTGAGGAGAAATCTGAAAGCGGAGGGGCAGAGTGTAAAATACCCTCTGAAGATACCAGCTTTTCTCCTGAGGTTTCATTTGGAAAGGATGATAATATTATATCTGGGTCACTTGCAGAGGAAAAGTTAGCAGACTCGAATACCGAACTATCCAGTAACTCGTTTTCTAGATTTTCAGCTTCCACAACCTGTAGTGATTCATCTGATGATTCCTCTGTTTGTGAGAGTATCATCTCAAATGGGCATGGCAGATCTGAGGGACATATTTCTGTTGTTCCCAACCTTGACATTCCTGATAAAACCACCAGCGATAGCAGGATGGATTCAGCTGTATCTTCTTCACCAAAGTTTGCTAGTTTGCTTGATTCAATTGATGGTTCTTCTACAATTCATAAATTAAATAATAATGCACATGGTTCTAGTAAAGAAGAGAGGAGGCTTGCATCAAATGGTGCATCAGGCTCGAGCATGTTGAAAGGGGTGAAAATTGAGTCTTCTGGATTCTGGGATCAAGCTTTTGATTCTGGAGGGATTAAAGTTGAGACTAATAATGACATTTGTCCATCCCATTATGATGAATCCACCGGTGAAAAGACTGATTCTGGATTGTCATTTCGCTTTCATTTCAGCCCCATGCCTCCTTTGCATGTACGAGATACTGAGGCTAAGGAATCTTTGCCCGATGACACTCTTCAAAACTCTGTTGGGAAGAATAAGAAAAATCTAGGATCAACATCTTCTGAGTATGACAACATGGATTCTTTAAAGGCGAAAAACCTCTCATTCATCATCGACGATGGTTCCAATTTTATGAGCAATATTCCCAGTGGTTGTGAATCTAAAGACAGCTCTAAGCCACCTCTATATTCCTTTTCCTCCCGATCCCCCAATGTTGGTAAAGATCAATGTTCTGCTGATGCTATGAACATCAATAACTTGCAATCATCTGTCTCTGTGGCATCAAATCACGTCGTGGACAATCATGGCCATACCTTGAAGTCCACCGATATTAGATGTCAGCCATTTGAGCTTGCTGATTCTAAATTAGCTTCTACAACTGAAGGACATTCTCAGCACGGTACAGAACATAGGAATAATGGCATAGAAATTGGGACAGTCACTTCTTCTTATGTTGCTAGCTCTTCTGCAAATTCCAAAAGTGGCTTGAAAACATCTGTTTTAAAAGTCGTTGATCAGTTTAGAGGATCAAATTTGTCAAAGCACATTCCTTTAGCAGTTGGGAGTGATATTGCTGGAAAATACAATGACAAGGGTCTTTTTCCGTACGAATTATTTGTCAAGCTTTATAACTTCAACAAGGTGGAGTTGCAGCCATTCGGTCTTATAAATTGTGGAAACAGTTGTTATGCTAATGCTGTACTTCAATGCCTAGCTTTTACACCACCCTTAACTTCTTATTTGCTTCAAGGTCTTCATTCTAAATCATGTGCAAATAAAAAATGGTGTTTCGTCTGTGAATTTGAAAGTTTGATTTTGAAGTCAAAGGATACAAAATCTCCACTATCTCCAATGGCCATACTCTCTCAACTGCAGAGTATTGGGAGTCATCTTGGTAATGGCAAAGAAGAAGATGCACATGAATTTCTAAGACATGCTATTGACACAATGCAATCTGTTTGCCTTATGGAAGCTGGGGAAAATGTATCGGGTTCGTTGGAAGAGGACACTACTTTAATGGGTCAAACATTTGGAGGCTACCTTCGATCAAAGATAAAATGCATGAAATGTGGTGGGAAGTCTGAGCGTCAAGAAAGGATGATGGATCTAACTGTTGAGATAGAAGGGGAGATATCAACACTGGCGGAGGCTCTTCGACGGTTTACAAGCACTGAGACTTTGGATGGAGAAAACAAGTACCACTGTGTCAGATGTAAATCGTACGAGAAGGCCAAGAAGAAGCTGACAGTTTCAGAGGCACCCAATATTCTCACAGTTGCATTAAAGAGATTTCAGTCTGGAAAATTTGGGAAGCTCAACAAGCCTATTCAATTTCCAGAAATACTTGACCTGGCGCCTTTCATGAGTGGAACGAGTGATAAGACACCCATATACAGATTGTATGGAGTGGTTGTTCATTTGGATATTATGAATGCTTCTTTTTCGGGTCACTATGTGTGTTACTTGAAGAATATCCAAAACAAGTGGTTCAAGGTTGACGACAGCGTGGTGACAGCTGTTGAATTAGAGAGAGTCTTGACAAAAGGAGCATATATGCTTTTTTATGCAAGGTGCTCTCCAAGGGCCCCAAAATTAATTAGGAACAGGATACTATCCCCTGATTCAAAAAGCAAGGTCAATGGAAAGTCTCTTACAACGAAACCAAGATTTATGTCGTCAAATTCTGGTGCAGCTGAATCCATCAGTAGTTCAATATCTCCAGATGGATCACCCACCTTGGAGTCTTTCTATTCAAAGTTTCACCACCTGAAAAGGATTTTAGAAGAAGACTCGTCAAGCGACAGTTCATCCCTTTTCAGCAGCAATTCTGATGAAGGTTCTTGCAGTACTGATAGCACCCGTGATTCAACCAGCACAGATGACTTCTCCGATTATATTTTTGGTGATTCAGGGCATGGATGGAGTAACGCGTGGAGGAATTCCGATTCTGACACATCCTCATCCTCCTCATCTCCCTTGAATTGTAGACATTCGCCCCTATCCGAAATGGACAAGTACGATTCAGTTTCTCCAGACCCCACAGGTTCAAATGCGAAGGCAGATAGTCCTTTATTCAGTAACAAACGGGGGGATGTTGAGCGGAGGGGTGGCGGTATTTCTTATTTGCATTCTGACTCAATTTTACAGCATAGAAAATTAGACagtagtagcattagcagcaatagtaatagtagGGACGCTGACTCGTTTCTGAAACTAGGATCTAACCATTTTAATGATATGAACTCTGGTATATCATGTAGAAAGTCAAGGAAAAGAACTGATTGA 3390 0.415 MRVTGDLGFSSLVLVVVCVVLPVIGFVIRRKWKLAVARNEEINRLLILAAEETARAETEASGVYGTVVPATYNYQCALCYFPATARCAQCKSVRYCSAHCQTVHWRQGHKFECHPPSKTHQSDGVISDIHKREVVQDYTGIREEKSESGGAECKIPSEDTSFSPEVSFGKDDNIISGSLAEEKLADSNTELSSNSFSRFSASTTCSDSSDDSSVCESIISNGHGRSEGHISVVPNLDIPDKTTSDSRMDSAVSSSPKFASLLDSIDGSSTIHKLNNNAHGSSKEERRLASNGASGSSMLKGVKIESSGFWDQAFDSGGIKVETNNDICPSHYDESTGEKTDSGLSFRFHFSPMPPLHVRDTEAKESLPDDTLQNSVGKNKKNLGSTSSEYDNMDSLKAKNLSFIIDDGSNFMSNIPSGCESKDSSKPPLYSFSSRSPNVGKDQCSADAMNINNLQSSVSVASNHVVDNHGHTLKSTDIRCQPFELADSKLASTTEGHSQHGTEHRNNGIEIGTVTSSYVASSSANSKSGLKTSVLKVVDQFRGSNLSKHIPLAVGSDIAGKYNDKGLFPYELFVKLYNFNKVELQPFGLINCGNSCYANAVLQCLAFTPPLTSYLLQGLHSKSCANKKWCFVCEFESLILKSKDTKSPLSPMAILSQLQSIGSHLGNGKEEDAHEFLRHAIDTMQSVCLMEAGENVSGSLEEDTTLMGQTFGGYLRSKIKCMKCGGKSERQERMMDLTVEIEGEISTLAEALRRFTSTETLDGENKYHCVRCKSYEKAKKKLTVSEAPNILTVALKRFQSGKFGKLNKPIQFPEILDLAPFMSGTSDKTPIYRLYGVVVHLDIMNASFSGHYVCYLKNIQNKWFKVDDSVVTAVELERVLTKGAYMLFYARCSPRAPKLIRNRILSPDSKSKVNGKSLTTKPRFMSSNSGAAESISSSISPDGSPTLESFYSKFHHLKRILEEDSSSDSSSLFSSNSDEGSCSTDSTRDSTSTDDFSDYIFGDSGHGWSNAWRNSDSDTSSSSSSPLNCRHSPLSEMDKYDSVSPDPTGSNAKADSPLFSNKRGDVERRGGGISYLHSDSILQHRKLDSSSISSNSNSRDADSFLKLGSNHFNDMNSGISCRKSRKRTD 1129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02699 1129 MobiDBLite consensus disorder prediction 143 168 - -
Car05g02699 1129 ProSiteProfiles Zinc finger MYND-type profile. 76 113 IPR002893 -
Car05g02699 1129 ProSitePatterns Zinc finger MYND-type signature. 76 113 IPR002893 -
Car05g02699 1129 Pfam Ubiquitin carboxyl-terminal hydrolase 587 889 IPR001394 GO:0004843|GO:0016579
Car05g02699 1129 MobiDBLite consensus disorder prediction 967 994 - -
Car05g02699 1129 Pfam MYND finger 76 113 IPR002893 -
Car05g02699 1129 MobiDBLite consensus disorder prediction 368 391 - -
Car05g02699 1129 MobiDBLite consensus disorder prediction 1086 1119 - -
Car05g02699 1129 MobiDBLite consensus disorder prediction 365 391 - -
Car05g02699 1129 Gene3D - 67 119 - -
Car05g02699 1129 MobiDBLite consensus disorder prediction 1086 1129 - -
Car05g02699 1129 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 587 892 IPR028889 -
Car05g02699 1129 MobiDBLite consensus disorder prediction 205 220 - -
Car05g02699 1129 MobiDBLite consensus disorder prediction 910 943 - -
Car05g02699 1129 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 19 1104 - -
Car05g02699 1129 SUPERFAMILY Cysteine proteinases 583 894 IPR038765 -
Car05g02699 1129 MobiDBLite consensus disorder prediction 1014 1066 - -
Car05g02699 1129 MobiDBLite consensus disorder prediction 274 297 - -
Car05g02699 1129 Gene3D Cysteine proteinases 580 903 - -
Car05g02699 1129 SUPERFAMILY HIT/MYND zinc finger-like 69 116 - -
Car05g02699 1129 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 588 603 IPR018200 GO:0004843|GO:0006511
Car05g02699 1129 MobiDBLite consensus disorder prediction 1014 1031 - -
Car05g02699 1129 MobiDBLite consensus disorder prediction 205 234 - -
Car05g02699 1129 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 16 19 1104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02699 Car-Chr5 72104518 72112109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02699 567 1038 Miscellaneous Gene Families AT4G31670 41.736 4.79e-124 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02699 K11855 - gmx:100793079 1405.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02699 05 72104518 72112109 Car05g02699 05 72104518 72112109 ECH