Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02683 ATGTCCACTAACGAAGATTTCCAAGGTGTTTCAAATTGTTATGTGTTCAAGAGCCGGGTGCAGGAGTATGCTCAGAAAGCTGGACTCCCCACACCTGTCTATGAAACTATCAAGGAAGGGCCTTCTCATGAACCTTCTTTCAGGTCAACGGTGATTGTGAATGATGTTCGGTATGATTCTTTGCCTGGCTTTTTTAACCGGAAAGCAGCAGAGCAGTCAGCTGCAGAGGTTGCTTTGGTGGAGTTGGCCAAATCTGGTGAAGTTAATCAATCAGTCACTCTACCTGTTCATGAAACTGGATTATGCAAGAATTTACTTCAGGAATATGCACAGAAGATGAACTATGCAATGCCAACTTATCATTGCAAAAAGGATGAAACACCAGGTAGAACAACGTTATTTTCATGTACAGTCGATATTGGTGGGATTCTCTATATAGGGGGGATGACAAAAACAAAGAAGGAAGCAGAGATTAAAGCTGCAAGAACTGCTTTATTAGCTATCCAGACAAATGCATCCCAGGCTTCTCAAAACCAGTTTGGCTATTTAACAGTCATTCCATCCAGGAAAAGGGCAACTGATTCTGTCGCTGTTGTCGACGAGGCTTCAAAGCCTAAGAAAGCACGCTTTAAAAGGAAATTTCCCAAGAGGAAACCATCTAGAGATAAGAAGCGCCATATTCTCACTGATAATGCTGGCATTGGAGCAAATATCAATCCCGGGGTAGAATCACTTGTGACTGTTAATGATGAATCTGGCCTCCATGAAACCAAATCCGAAGCAGCAGCTTTCCCTTCAGAAGCCATGAAGAATTATGAGAACGGAGTATCAACTGACCATTGTGAGAAAGAGACATTAGCTTGGGACGGGTCTTTCGCTTTGAATAATCAAGAGATATTTGAAAATGGGAAGTCATCAGAATTGCATTTCACAGAGAACAGTTTTGGGAATGTTGTTACAGAAGCGGCGTTCGTGCCTATGCCTAACGGATACATACCGCCGATGATTGTGGAGATGACCGAACAACATTGTAATGGAGATATAGTCTCTGGCAATGAGGGGTTTTGA 1068 0.426 MSTNEDFQGVSNCYVFKSRVQEYAQKAGLPTPVYETIKEGPSHEPSFRSTVIVNDVRYDSLPGFFNRKAAEQSAAEVALVELAKSGEVNQSVTLPVHETGLCKNLLQEYAQKMNYAMPTYHCKKDETPGRTTLFSCTVDIGGILYIGGMTKTKKEAEIKAARTALLAIQTNASQASQNQFGYLTVIPSRKRATDSVAVVDEASKPKKARFKRKFPKRKPSRDKKRHILTDNAGIGANINPGVESLVTVNDESGLHETKSEAAAFPSEAMKNYENGVSTDHCEKETLAWDGSFALNNQEIFENGKSSELHFTENSFGNVVTEAAFVPMPNGYIPPMIVEMTEQHCNGDIVSGNEGF 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02683 355 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 15 84 IPR014720 -
Car05g02683 355 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 101 170 IPR014720 -
Car05g02683 355 Gene3D - 98 170 - -
Car05g02683 355 SUPERFAMILY dsRNA-binding domain-like 15 82 - -
Car05g02683 355 SMART DRBM_3 16 83 IPR014720 -
Car05g02683 355 SMART DRBM_3 102 169 IPR014720 -
Car05g02683 355 CDD DSRM_AtDRB-like_rpt1 15 83 IPR044450 GO:0003725
Car05g02683 355 Gene3D - 16 97 - -
Car05g02683 355 PANTHER DOUBLE-STRANDED RNA-BINDING PROTEIN 1 1 311 IPR031147 GO:0003725
Car05g02683 355 Pfam Double-stranded RNA binding motif 17 79 IPR014720 -
Car05g02683 355 Pfam Double-stranded RNA binding motif 103 166 IPR014720 -
Car05g02683 355 PANTHER RIBONUCLEASE III 1 311 IPR011907 GO:0003723|GO:0004525|GO:0006364
Car05g02683 355 SUPERFAMILY dsRNA-binding domain-like 103 169 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02683 - - gmx:100806833 461.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02683 05 71892699 71896244 Car05g02683 05 71892699 71896244 ECH