Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02682 ATGAAAAGATCAGATGAGGATGAGTTGAAATACACAGAGGATGTGATAGGGGATAATTTTAGTAATTACTCTGCTTGGCATAATAGGAGTGTGCTTTTATCTGATTTATTTAAAAGAAAGGCCGAAGGATTTTTCCCTAAAGAGAAAGTCTTGCGAGAGGAGTACGAGCATGTCCACAATGCTATTTTTACTGATCCAGATGATCAGAGCGGTTGGTTTTATCATCTTTGGCTTATTGATCAAACAGTGAAAAACGATACTCCTCTACTCGTTTCTTCTTGGCCATCTCATGGATCAAATATAACCCTAAATGAAAACAACTACCTTCATGATTGTGGTTTGTCTCTGTTGAATAGTACACTATCCGACACTAGAACACTTCCGGTCATTCTATATTTCAATCAAGCTGTTGAAGGCATCAACTCGTCTACAGTTGCCGTTAAATCTGAAGTGTTGCAGGAGGATCTTGTTTGGAAACCACTTTCAACAAATAACTCGAGCACTGCTCAAATTTGGGTTGCATACCTAAACCTCAATAATACAGAACTCCAACTATCAAAAACTTACTCTATAGAGATCACTATTGGACATTCTATGGGTATTGTATCTTCAAATGGATATCATTATGGGGATCCTTCCCAAATTACCTTTAAATTGTGTGTACAAACTGCTTTTAAAGAACCCGTTGAAGGACAATGTGCTAAGTTGACTTCATGGAAGGACAATGATTTCCAAAAAATTGATAATTTTGAAGAATCACATTCCACTGTATCTGCTGATCACCGCATTCCAACAACTTCCAATTGGTGCATGGAGGAAATTGATGAAGAAATAACTAATTTTCGGGATTTATTGTCAGACTGTAAAATTGGAAAGCTTACACTTGCGAGACTTTTGACTGCTCTTGATTTGTTATCACCTCAACATGATAAAAGAAAATATCATACTGAAGAAGTTCTTAAACTTTACACTGATCTAATGAAGTTGGATCCAACACACTCTCTATACTACAAGGATGAGCATAGCCTGGTATTACTTCAGCAGATAACTTCATCTGGAGAGTCTTTACTACCACATTGCCACTACTATAAAAATGCAACAGAAACGAATACTAGTTATATCTGTCTACGATTACAAAATCTATCGTTGTCACGGATGGGGTCCATTCAGAATTTACTGTGGGTGCAAATGCTAGACCTTAGCCACAACGAACTTCGATCAATTGAAGGGTTGGAGGCCATGCAACTTCTATCGTGCATAAATCTGAGTCACAATAAATTTGGTAGTTTTACTGCTTTGGGGCCTCTCAGATTGCTAAAGTCACTTAAAGTGTTGAATATCTCTTACAACGAGCTAGGCTCTCACTCAATTGACACAAGAAGATACCTATGCTCTTCTCCTTTAGCACATACTGAAGTATTTGCCTGGGACCGTTTTGAAATCCTTTGTGGTAGTTTTAGTGCCACAAAATTTTGGGAAGCTTTCTTGATATTTGAAAGCTTGAACTTGATGGATTTGAACATAACAGGAAATGCAGTTGCTGATGAGAACTTCACGTCATTTATTGTCAAAGTTTTGCCTACACTAAAGTGGCTAAATGGTGAAGAGTTATCTTGA 1617 0.3741 MKRSDEDELKYTEDVIGDNFSNYSAWHNRSVLLSDLFKRKAEGFFPKEKVLREEYEHVHNAIFTDPDDQSGWFYHLWLIDQTVKNDTPLLVSSWPSHGSNITLNENNYLHDCGLSLLNSTLSDTRTLPVILYFNQAVEGINSSTVAVKSEVLQEDLVWKPLSTNNSSTAQIWVAYLNLNNTELQLSKTYSIEITIGHSMGIVSSNGYHYGDPSQITFKLCVQTAFKEPVEGQCAKLTSWKDNDFQKIDNFEESHSTVSADHRIPTTSNWCMEEIDEEITNFRDLLSDCKIGKLTLARLLTALDLLSPQHDKRKYHTEEVLKLYTDLMKLDPTHSLYYKDEHSLVLLQQITSSGESLLPHCHYYKNATETNTSYICLRLQNLSLSRMGSIQNLLWVQMLDLSHNELRSIEGLEAMQLLSCINLSHNKFGSFTALGPLRLLKSLKVLNISYNELGSHSIDTRRYLCSSPLAHTEVFAWDRFEILCGSFSATKFWEAFLIFESLNLMDLNITGNAVADENFTSFIVKVLPTLKWLNGEELS 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02682 538 Pfam Protein prenyltransferase alpha subunit repeat 6 34 IPR002088 GO:0008318|GO:0018342
Car05g02682 538 Pfam Protein prenyltransferase alpha subunit repeat 51 81 IPR002088 GO:0008318|GO:0018342
Car05g02682 538 PANTHER - 2 448 - -
Car05g02682 538 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 50 84 IPR002088 GO:0008318|GO:0018342
Car05g02682 538 PRINTS Leucine-rich repeat signature 395 408 - -
Car05g02682 538 PRINTS Leucine-rich repeat signature 439 452 - -
Car05g02682 538 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 4 38 IPR002088 GO:0008318|GO:0018342
Car05g02682 538 PANTHER PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT 2 448 - -
Car05g02682 538 SUPERFAMILY L domain-like 364 536 - -
Car05g02682 538 Gene3D Ribonuclease Inhibitor 359 538 IPR032675 -
Car05g02682 538 SUPERFAMILY Protein prenylyltransferase 6 350 - -
Car05g02682 538 Gene3D Protein prenylyltransferase 1 113 - -
Car05g02682 538 ProSiteProfiles Leucine-rich repeat profile. 394 415 IPR001611 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02682 K14050 - gmx:100807900 876.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02682 05 71886569 71891378 Car05g02682 05 71886569 71891378 ECH