Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02681 ATGGACCCCAAGGAGAAACAAGCGATGTACCGCGACATCGGTTTACAAATCGTTATGATCCTTCTATTGATCTTAATGTTTCTCGGTATGCACGGTATTCCACAGAAATTACTCGCCAAACTCCGACTCCGAAACCGAACCGGCGTCAAAGCTAAGCGTCACTTCGTAAGAGGCGCTCAGCTTCTCGCACAAGCTAGATCTTCCAAAAACAAATCCAGATCCGCTATAAATTCCCTCGCTAACGAAGCCCTAGCCGAAGCCGAACAAGCAATCGCGCTTGATCCTAAAGACGCCGCTTCTTATCTTCTCAAAGCTATGGTTCTCGATCTTCAAGGTTTTCGAACTTCCGCGCTCGAATCTCTTGACGCGGCGTTGTCTCCGCTTGCGGCTGGTTCTTTAGCCGAAGGTGAACGAGGTGACGCGCTTTATAAGAGAGCCGAGTTGAAACTCGCGACGAGTGAACGCGGACGAGTTGACTCGGCGCTGAAGGATTTGACTGAGTCGGTTATTTTGAGTCCTAAGAACGCGAAAGCTTGGTCTGCGTTGGGAGAGTGCTATGAAGGAAAGAAAATGGAAGAGGAAGCTAAGAAGGCTTATAAGGAGGCTCTTGAGTTGGAGCCACATTTTTCTGTGCCGCTAGAAGCACTTAACAGTAATAATGGAACAAAAGTCGAAGATCTGTCTTGA 687 0.4818 MDPKEKQAMYRDIGLQIVMILLLILMFLGMHGIPQKLLAKLRLRNRTGVKAKRHFVRGAQLLAQARSSKNKSRSAINSLANEALAEAEQAIALDPKDAASYLLKAMVLDLQGFRTSALESLDAALSPLAAGSLAEGERGDALYKRAELKLATSERGRVDSALKDLTESVILSPKNAKAWSALGECYEGKKMEEEAKKAYKEALELEPHFSVPLEALNSNNGTKVEDLS 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02681 228 Gene3D Tetratricopeptide repeat domain 38 134 IPR011990 GO:0005515
Car05g02681 228 Gene3D Tetratricopeptide repeat domain 135 223 IPR011990 GO:0005515
Car05g02681 228 PANTHER - 10 219 - -
Car05g02681 228 ProSiteProfiles TPR repeat profile. 176 209 IPR019734 GO:0005515
Car05g02681 228 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 10 219 - -
Car05g02681 228 SUPERFAMILY TPR-like 81 213 IPR011990 GO:0005515
Car05g02681 228 Pfam Tetratricopeptide repeat 176 209 IPR001440 GO:0005515
Car05g02681 228 SMART tpr_5 139 175 IPR019734 GO:0005515
Car05g02681 228 SMART tpr_5 176 209 IPR019734 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02681 - - gmx:100799725 227.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02681 05 71881877 71886476 Car05g02681 05 71881877 71886476 ECH