Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02657 ATGAGCACCCCAAGAGTACGAGGTGTTGGGAGAAAAATAATCAACTTTGGTGAAATAAGTGGCATTGCATATTCTCCAAAAGGATTAATGCAGAAACGCAGAAAAGTTCCATTGGGGATTTTATTAAGGAGGTTTCTTGGTGCAACGATTTTCTCAATAGTTGTCACTACTATTTTCTTTGTTCACGTACATGTATCCACTTCTACAACTCATCGTCACGATCACAAGTTCAATCACAAGATTCCCACGTTTCGTGACCTTCAAAGCTGGACCCGAGAGCTTGCTCCACCCCATTTATCAAAGGCTCTACTCTCTGCTCCCAAGTTAAATGATTCAAGAGGTGATCCAGACTATGAGACTCTATGGAAGCCTCCACCAAATCATGGATTTCAACCCTGTACAAAGCCTACTCCTGATTACAAATCTTCTGCGAATTCGCGAGGTTATCTTCTAGTGCATACAAACGGCGGACTCAACCAAATGCGTGCCGGGATATGTGATATGGTAGCTATAGCTCGCATCATAAATGCCACCCTAGTGATTCCAGAACTTGACAAGAAGTCATTTTGGCAAGATAATAGCAATTTCTCTGATATCTTTGATGATAAGAGGTTTATTAGTTCTCTTGCTGATGATATAAAAATCATTAAGGAACTTCCCAAGGATCTGGCTAATGCAAACAGAATGGTGAAACAATTCAAAAGCTGGTCTGGTTTGGATTACTATGAAAATGAGATTGCTGCTCTTTGGGATAATTTCAAAGTTATTCAAGCTTCCAAAACCGATTCTCGATTGGCAAATAACTATCTACCTCCAGATATTCAAAAGCTTCGATGCCGTGCTTGTTATGAAGCTCTTCGTTTCTCTCCTCGCATTGAACAAATGGGAAAAATATTGGTGGAGAGGATGAGGTCATTTGGTCCTTATATTGCGTTACATTTACGTTACGAGAAGGATATGCTTGCGTTTAGTGGCTGCACGCATGATTTGTCAACTACTGAGGCTGAAGAATTAAGGATTATCAGAGAGAATACTAGTTATTGGAAAAGAAAGCATATTGATCCCAAAGAAGAAAGGTCCAAAGGGCTTTGTCCCTTAACTCCAAAGGAAGTTGGAATTTTCCTTAGTGCTCTTGGATACCCTACAAAGACTCCAATATATATTGCTGCTGGGGAGATATATGGAGGCGAATCCCATATGACTGAATTGCGGTCGCGCTATCCATTTTTAATGAGCAAGGAAAAGTTGGCATCTATTGAGGAGCTTGAACCCTTTGCTAATCATGCGTCTCAAATGGCTGCTCTTGACTATATTGTATCGGTTGAAAGTGATGTATTTGTACATTCTTACCCTGGAAACATGGCACGAGCTGTCGAAGGTCATCGCCGTTTCCTTGGGAGAGGAAGAACCATATCTCCAGATAGGAAAGCTCTTGTTCGTCTGTTTAACAAACTGTCAATCGGATCAATGACTGAGGGGAAAAAGTTGTCTTATATAGTGAATGATCTCCACAAAGGACGGGTTGGCTTGTTAAGGAAGAGAAAAGGGCCTATTCCTGGAACAAAGGGAGTGGACAGGTTTCGATCAGAAGAAACATTTTATGCAAATCCTTTACCTGATTGTTTATGTCAGACAGAATCAACACCTTTAGTGTAA 1656 0.4076 MSTPRVRGVGRKIINFGEISGIAYSPKGLMQKRRKVPLGILLRRFLGATIFSIVVTTIFFVHVHVSTSTTHRHDHKFNHKIPTFRDLQSWTRELAPPHLSKALLSAPKLNDSRGDPDYETLWKPPPNHGFQPCTKPTPDYKSSANSRGYLLVHTNGGLNQMRAGICDMVAIARIINATLVIPELDKKSFWQDNSNFSDIFDDKRFISSLADDIKIIKELPKDLANANRMVKQFKSWSGLDYYENEIAALWDNFKVIQASKTDSRLANNYLPPDIQKLRCRACYEALRFSPRIEQMGKILVERMRSFGPYIALHLRYEKDMLAFSGCTHDLSTTEAEELRIIRENTSYWKRKHIDPKEERSKGLCPLTPKEVGIFLSALGYPTKTPIYIAAGEIYGGESHMTELRSRYPFLMSKEKLASIEELEPFANHASQMAALDYIVSVESDVFVHSYPGNMARAVEGHRRFLGRGRTISPDRKALVRLFNKLSIGSMTEGKKLSYIVNDLHKGRVGLLRKRKGPIPGTKGVDRFRSEETFYANPLPDCLCQTESTPLV 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02657 551 PANTHER AUXIN-INDEPENDENT GROWTH PROMOTER-LIKE PROTEIN 27 549 - -
Car05g02657 551 CDD O-FucT_plant 149 470 IPR024709 -
Car05g02657 551 PIRSF UCP009360 23 547 IPR024709 -
Car05g02657 551 Pfam GDP-fucose protein O-fucosyltransferase 149 464 IPR019378 -
Car05g02657 551 PANTHER OS02G0726500 PROTEIN-RELATED 27 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02657 Car-Chr5 71545448 71550581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02657 93 546 Miscellaneous Gene Families AT1G22460 66.960 0.0 651
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02657 - - gmx:100807411 831.247
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02657 05 71545448 71550581 Car05g02657 05 71545448 71550581 ECH
Car02g01154 02 34209499 34215120 Car05g02657 05 71545448 71550581 PCT