Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02648 ATGAGAAGACCCTTGAAACACAATAATCACGATCTATTTGATTATTTATCCGATGATATTGTCATCTTCATTCTCACCAAATTCAGCTCCACTGCCGCTTCTCCTTCTCAATTTTTCACTATATTTTTAATATGCAAGAGGTTGAAACGGTTAGGGTTTCATCCTATGGTGTTATCAAAAGCTGGGCCCAAAGTATTCGCCATTAAGCCCAAAAATTGGTCAGATAGATCTCACCTTTTTCTCAGACGCTGCGTCACCGACGGTAACGTCGATGCTTGTTATACTCTTGGAATGATTCGATTTTATTGTCTTCAAAACCGAAGGAGCGGGCTATCACTGATAGCGAAGGCGGCGACTAAGATGCACGCGCCAGCGCTTTACTCACTCGCTGTGATTCAATTCAACGGTAGCGGGGGTTCTAAACACGACAAAGATCTACGCGCCGGAGTAGCGCTTTCCGCTCGCGCGTCACTTCTCGGCCACCTCGACGCGCTTCGTGAGTTAGGCCATTGTCTTCAAGACGGTTACGGCGTCAAACAAAATATTTCCCAAGGACGAAAATTGTTGGTTCATGCTAATCTCCGGGAACTCCTACTTATCCTACGCGCTGTCATGTTAGCGTCTCCTTCACCTCCCTCCAGTTCCTCTACGCCGTTAACGTTGAGTGGTTTGAACGACTTGTCGGTACCGTTGCTGAGTGACTACGGTTACAACGTGACGGTGCGGGAGATTCATCCGGCAAATTGGTTTTTGAGGGAGTGGTTTGAATCTGGTCCCGGAATGTTGAACGAAGGATTGAGGTTATGTTCGCATATGGGATGTGGACGGGTGGAGACGCGGCCGCATGAGTTTCGGCGGTGTTCTGTTTGCAGTAAGGTTAATTATTGTTCGCGAGGGTGTCAGTCTTTGGATTGGAAATTACGGCATAAGAGGGAGTGTTCAACTCCGAATTTGTGGTTTGATGATAACGACGGTGATATTGCATTGTGA 990 0.4697 MRRPLKHNNHDLFDYLSDDIVIFILTKFSSTAASPSQFFTIFLICKRLKRLGFHPMVLSKAGPKVFAIKPKNWSDRSHLFLRRCVTDGNVDACYTLGMIRFYCLQNRRSGLSLIAKAATKMHAPALYSLAVIQFNGSGGSKHDKDLRAGVALSARASLLGHLDALRELGHCLQDGYGVKQNISQGRKLLVHANLRELLLILRAVMLASPSPPSSSSTPLTLSGLNDLSVPLLSDYGYNVTVREIHPANWFLREWFESGPGMLNEGLRLCSHMGCGRVETRPHEFRRCSVCSKVNYCSRGCQSLDWKLRHKRECSTPNLWFDDNDGDIAL 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02648 329 ProSiteProfiles Zinc finger MYND-type profile. 271 313 IPR002893 -
Car05g02648 329 PANTHER MYND DOMAIN-CONTAINING 6 326 IPR044508 -
Car05g02648 329 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 6 326 - -
Car05g02648 329 Gene3D Tetratricopeptide repeat domain 74 199 IPR011990 GO:0005515
Car05g02648 329 SUPERFAMILY HCP-like 75 190 - -
Car05g02648 329 SUPERFAMILY HIT/MYND zinc finger-like 267 315 - -
Car05g02648 329 Pfam MYND finger 274 313 IPR002893 -
Car05g02648 329 Gene3D - 264 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02648 Car-Chr5 71481337 71482540 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02648 - - cam:101501389 662.529