Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02639 ATGGAAGAACAATCCGTAAACGGCATCATGTCAATATCAAACAGCACCAAAACGACGCAAGATTTAGCCACTGAAGGTCATAAGTACCTTGAAGAAACAATTCAATATGCTTTTAAGATACTCTCTTCCATGAACGACGAACTTTGCAACCCCGTTTTATGGTCTACTTCTCCTTCCGCTGCTACCTCTCCCAACGCTCCTTCCTCAAACGGAGACGCCAATTCTGATAGCTCCAGCCAACACGCCGACGGCGCTGCTCCCGGTGGCGGTGCTGGTGGCGCTCTTGAAGAAGCCCGTTTTCGGTATAAAAATGCTGTGGCTGGACTTCGGACTATTCTAGCTGCAATCCCCAACTCCCAGAAGGTAAACACATTTGACAGTGGTTCAGCTGATAGCCCTGCGGATGAAGCTGAAATCGAGAAGTTGGAAGAGCGAGCCTCCTCTTTAAGAAAGGAACTTGTCAACAAGAACTTGCACCTGAAGATACTCATAGACCAACTTCGAGAACTTATCACTGACATATCAACATGGCAAAGTCCTTTTTCGACATGA 552 0.4692 MEEQSVNGIMSISNSTKTTQDLATEGHKYLEETIQYAFKILSSMNDELCNPVLWSTSPSAATSPNAPSSNGDANSDSSSQHADGAAPGGGAGGALEEARFRYKNAVAGLRTILAAIPNSQKVNTFDSGSADSPADEAEIEKLEERASSLRKELVNKNLHLKILIDQLRELITDISTWQSPFST 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02639 183 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 30 12 182 IPR034568 GO:0016592
Car05g02639 183 MobiDBLite consensus disorder prediction 58 82 - -
Car05g02639 183 Coils Coil 132 159 - -
Car05g02639 183 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 30 12 182 - -
Car05g02639 183 MobiDBLite consensus disorder prediction 58 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02639 Car-Chr5 71403155 71407644 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02639 - - ccaj:109797165 248.44