Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02633 ATGGCTGCAATCAACAACATTGGCTCACAATTTCATGGGAATTGGAATCTTCACGTTGCAACAAAGAAGGAAAATTTGATGAGCAAAGGGAAGGTTTTGAGGGTGAGTTTTTATTCTCCACAAAAAAATAACACATTGAACAACAAAAGAAGATTGATTACAAGTTGTAATGGTAATACTTCTCATAAAGTGGACACAATTAATGGAATTACTAAGGTGAATGGTTTACAAGTGGCAGAGTCTCCTCTTGCATCAAGAAAGTTACCAAATGAAAATACACAAGATATTGCTCTTGTTACAAATGGAAAGTTTGTGGAAGGGAGATTTGTTTTTAGGCAGATTTTTGTTATTAGGTCCTATGAAATTGGACCTGATAGAACTGCCACCATGGAGACACTCATGAATTTTCTTCAGGAAACAGCTCTAAATCATGTTACAAGCTCTGGGATAGGAGGAGATGGCTTTGGAGCTACACGTGAGATGAGTCTAAGGAAACTCATTTGGGTTGTTACTCGTATTCAGGTTCAAGTGCAGAGATACAACAAATGGGGAGAAGAAATTGAAATTGATACTTGGGTGGATGCAGCAGGAAAGAATGGCATGCGAAGAGATTGGATTATTAGGGATCGCTGTACCAAAGAGATCATAACTAAAGCAACAAGCACATGGGTGATAATGAATAGAGAAACAAGAAGACTATCAAAGATACCTGAAGAAGTTAGAAGAGAGCTTTCTCCTTTTTACATTCATAGGATTGCCGTAGCTAGAGAAGAAACAGACTGTGAAAAGATAGAAAAACTCACTGATGACACTGCTGAAACAACAAGATCTGGTTTAGCCCCAAGGTGGAATGACATGGATGTTAATCAGCATGTAAACAATGTGAAATACATCGGATGGCTTCTAGAGAGTGTGCCAATAAAAGTACTAGAAGATTATAACATGACAAGCATGACATTAGAGTTTAGGCGTGAATGTACACAATCAAATACTTTGGAATCAATGACATGTCCAACAGAAAGAGTAATTGGTGAATCCGATAACAATTCTATCAATAGAAAACCTGATCTTCAATACACACACTTGCTTCGTCTACAAGAGGATAAAAGAGATGTTGTTAGAGCAAGATCTGAATGGCATTTAAAGCATAATCAACAGTCATTAAATTAA 1170 0.3701 MAAINNIGSQFHGNWNLHVATKKENLMSKGKVLRVSFYSPQKNNTLNNKRRLITSCNGNTSHKVDTINGITKVNGLQVAESPLASRKLPNENTQDIALVTNGKFVEGRFVFRQIFVIRSYEIGPDRTATMETLMNFLQETALNHVTSSGIGGDGFGATREMSLRKLIWVVTRIQVQVQRYNKWGEEIEIDTWVDAAGKNGMRRDWIIRDRCTKEIITKATSTWVIMNRETRRLSKIPEEVRRELSPFYIHRIAVAREETDCEKIEKLTDDTAETTRSGLAPRWNDMDVNQHVNNVKYIGWLLESVPIKVLEDYNMTSMTLEFRRECTQSNTLESMTCPTERVIGESDNNSINRKPDLQYTHLLRLQEDKRDVVRARSEWHLKHNQQSLN 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02633 389 CDD 4HBT 111 227 - -
Car05g02633 389 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 29 385 - -
Car05g02633 389 Pfam Acyl-ACP thioesterase 110 380 IPR002864 GO:0006633|GO:0016790
Car05g02633 389 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 29 385 IPR045023 GO:0006633|GO:0016297
Car05g02633 389 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 277 379 IPR029069 -
Car05g02633 389 Gene3D Hotdog Thioesterase 102 385 - -
Car05g02633 389 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 109 254 IPR029069 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02633 Car-Chr5 71343020 71345098 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02633 102 382 Acyl Lipid Metabolism Gene Families AT1G08510 55.516 8.68e-108 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02633 K10781 - gmx:100791281 553.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02633 05 71343020 71345098 Car05g02633 05 71343020 71345098 ECH