Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02631 ATGGATGTCTCAAGGGACCCGAATTTAATTCCGGGTCGGATCGAAGATTCAGATTCAGAACTCGAACTCTACACCATTCCAAGTTCTTCCAGATGGTTCACGTGGGACGAAATCCACGAAACAGAGAAAACGGCGTTCAAGGAGTATTTCGACGGAACCTCAATTTCAAGAACGCCGAAGATATACAAAGAATACAGAGACTTCATCATAAACAAGTACCGTGAAGAACCTTCTAGAAGACTCACGTTCACCGAGGTGCGAAAATCACTAGTTGGTGACGTCACGTTTCTGTACAAGGTTTTCCTCTTTTTAGAGAGTTGGGGTTTGATCAACTACGGTGCGCCTTCTGGTGGTGACGGTGGGGTTGCGGAGAAGGAGCACGAGGAAGAGAGGTGTAAGTTGAAGGTTGAGGAAGGTGCTCCTAATGGGATTCGCGTTGTGGCTACGCCTAATTCGTTGAAACCTATTTCGCTGCCTCGAAACACGAAGAGTGCTGGTAATAATGTCGGTGGGGTTGCTATCAAAATGCCGCCGCTGGCGTCGTATTCTGATGTTTATGGTGATTTGATTAGTGGTAAGGAGTTCAGTTGTCGAAATTGTGGGGACAAATGTGGTTCTGGATATTACCGAAGTGCCAAGGATAATTTCATTATTTGCACGAAATGTTTCGAAAATGGGAATTATGGGGAGAAAAGGTCCATGGAGGAGTTCAAATTAAACGAGTCAAGTGAAATTAGTGCCAAACATGGTACTGTATGGACTGAGGGAGAAACTCTTCTTCTTTTAGAATCTGTTTTGAAGCACGGGGATGACTGGGAACTTGTTGCTCGAAGTGTTCAAACCAAGACTAAACTTGATTGTATTTCAAAACTGATTGAGCTGCCATTTGGGGAGCTCATGTTAGCCTCTGCTAACAGAAATGGTAACAGTAAAAATGTTACTGGCATCATGAACAACGGAAAACAAGTTCAGTCATCTACATCCAATCACCAAGAAACTTCAACGACACAGGATCAATCTTCTGAGCCTAAAAATGAAAATCAGCAGAATGGAGATGTTGTGCAAGAAAGTCCTCCAAAAAGGCAGCGTGTTGCTGCACTGTCAGATTCCAGCAGTTCACTGATGAAGCAGGTGGGACTTCTCTCTACAGTGATTGACCCTCATATCACAGCTGCTGCAGCTGATGCTGCTATTACAGCACTTTGTGATGAGAATTCGTTCCCAAGGGACATATTTGATGTTGAAGAGGATAATGCTTGTAGTGCAAAGTCTCTTATTAGTTGTTCAGCAAGAGCCCTCGAGGGTGAAGGTTCAGAGATGGTGGAGAGGTCCACTCACCCAGAAATAGACGTGGGATGCCCAAAGGATGACATACCATTGACACTACGTGTAAGAGCTGCAATTGGAACTGCTCTTGGAGCTACTGCTGCTCGAGCAAAGTTGTTGGCAGACCAAGAAGAAAGAGAGATTGAACATTTAGTAGCAACTATAATTGAAGCTCAGATTGAGAAATTGCAACAAAAGGTTAAACATTTTGATGAATTGGAGCTTTTGATGGAAAAGGAACATGCTGAAATGGAAGAGCTGAAAGATTCTATCTTGACTGAAAGGATTGATGTGTTACGGGAGACATTTAGATCTGGTATCACTAGATGGAAGGATTATCCTTGCGCAAAATCGTAG 1683 0.4349 MDVSRDPNLIPGRIEDSDSELELYTIPSSSRWFTWDEIHETEKTAFKEYFDGTSISRTPKIYKEYRDFIINKYREEPSRRLTFTEVRKSLVGDVTFLYKVFLFLESWGLINYGAPSGGDGGVAEKEHEEERCKLKVEEGAPNGIRVVATPNSLKPISLPRNTKSAGNNVGGVAIKMPPLASYSDVYGDLISGKEFSCRNCGDKCGSGYYRSAKDNFIICTKCFENGNYGEKRSMEEFKLNESSEISAKHGTVWTEGETLLLLESVLKHGDDWELVARSVQTKTKLDCISKLIELPFGELMLASANRNGNSKNVTGIMNNGKQVQSSTSNHQETSTTQDQSSEPKNENQQNGDVVQESPPKRQRVAALSDSSSSLMKQVGLLSTVIDPHITAAAADAAITALCDENSFPRDIFDVEEDNACSAKSLISCSARALEGEGSEMVERSTHPEIDVGCPKDDIPLTLRVRAAIGTALGATAARAKLLADQEEREIEHLVATIIEAQIEKLQQKVKHFDELELLMEKEHAEMEELKDSILTERIDVLRETFRSGITRWKDYPCAKS 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02631 560 SUPERFAMILY Homeodomain-like 30 113 IPR009057 -
Car05g02631 560 Pfam Myb-like DNA-binding domain 253 291 IPR001005 -
Car05g02631 560 CDD SANT 253 290 IPR001005 -
Car05g02631 560 ProSiteProfiles Myb-like domain profile. 253 287 IPR001005 -
Car05g02631 560 PANTHER BRAHMA ASSOCIATED PROTEIN 155 KDA 23 551 - -
Car05g02631 560 PANTHER SWI/SNF COMPLEX-RELATED 23 551 - -
Car05g02631 560 SMART sant 249 297 IPR001005 -
Car05g02631 560 Coils Coil 476 532 - -
Car05g02631 560 MobiDBLite consensus disorder prediction 311 369 - -
Car05g02631 560 Gene3D - 30 116 IPR036388 -
Car05g02631 560 Pfam SWIRM domain 27 112 IPR007526 GO:0005515
Car05g02631 560 Gene3D - 249 297 - -
Car05g02631 560 SUPERFAMILY Homeodomain-like 250 298 IPR009057 -
Car05g02631 560 Pfam SWIRM-associated region 1 470 544 IPR032451 -
Car05g02631 560 ProSiteProfiles SANT domain profile. 248 299 IPR017884 -
Car05g02631 560 ProSiteProfiles SWIRM domain profile. 24 121 IPR007526 GO:0005515
Car05g02631 560 MobiDBLite consensus disorder prediction 311 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02631 Car-Chr5 71333133 71337730 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02631 K11649 - gmx:100790238 754.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02631 05 71333133 71337730 Car05g02631 05 71333133 71337730 ECH