Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02626 ATGATTTCCCATCGTGAGTCTCTGGCGTTTATTTTTGGCATTCTAGGCAATGCCATCTCATTTATGGTCTTCCTCGCTCCAGTACCAACATTTTACCAAATCTATAAGAAGAAATCTACTGAAGGGTTTCAATCAATTCCTTATGTTGTTGCATTGCTGAGTGCAATGCTATGGATTTATTATGCACTTGCCAAAAGGGAACATAGTTTCCTTCTCCTCACAATTAACACATTTGGAGTAGGGGTAGAGTCACTTTACATTGCAATCTTCCTAGTTTGTGCCTCACATAAAGCCAGGCTTTCGACCATAAAGCTTCTTGTGTTGTGTAATGTGTTTGGATTCGGAGGAATGGTTGTTTCAACTCTGTATCTAACAAAGGCATCAGAACGAATTTCTATTATAGGATGGGTTTGTCTCGTTTTCAACATAGGTGTATTTGCTTCTCCTCTCGGCATTATTAAAAAGGTAATAGAGACAAGAAGTGTAGCATTCATGCCACTTAGTTTGTCATTCTTTTTGAGCTTAAATGCTATCATGTGGTTCTTCTATGGATTTCTCCTCAACGACTATTACATTGCTCTCCCAAATACGCTAGGATTTCTATTCGGGATAGTTCAGATGGTGATTTATTTGATTTATAAAAACTCCAATGAAGTGGACCCTAAGAAATTACAGGAACTAAATGGCCATATTATCGACATTGTGAAGATGGGCACAAACACAATGGTCATTTCTGGCCCAAATCAAGTAGCCAATAGTGGTGATGAGAATCCAAATAATGGAAAATGA 789 0.3802 MISHRESLAFIFGILGNAISFMVFLAPVPTFYQIYKKKSTEGFQSIPYVVALLSAMLWIYYALAKREHSFLLLTINTFGVGVESLYIAIFLVCASHKARLSTIKLLVLCNVFGFGGMVVSTLYLTKASERISIIGWVCLVFNIGVFASPLGIIKKVIETRSVAFMPLSLSFFLSLNAIMWFFYGFLLNDYYIALPNTLGFLFGIVQMVIYLIYKNSNEVDPKKLQELNGHIIDIVKMGTNTMVISGPNQVANSGDENPNNGK 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02626 262 Gene3D - 13 106 - -
Car05g02626 262 Pfam Sugar efflux transporter for intercellular exchange 11 97 IPR004316 GO:0016021
Car05g02626 262 Pfam Sugar efflux transporter for intercellular exchange 133 217 IPR004316 GO:0016021
Car05g02626 262 Gene3D - 128 225 - -
Car05g02626 262 PANTHER RAG1-ACTIVATING PROTEIN 1 4 255 - -
Car05g02626 262 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02626 Car-Chr5 71292828 71296701 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02626 1 239 Miscellaneous Gene Families AT5G50790 50.206 8.86e-88 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02626 K15382 - gmx:100805676 349.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02626 05 71292828 71296701 Car05g02626 05 71292828 71296701 ECH
Car06g00574 06 5793806 5796372 Car05g02626 05 71292828 71296701 PCT