Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02625 ATGTCGTCCCATACTCATCTATCTTTCGCCTTTGGGGTTCTAGGCAACATTTCCTCCTTCGTCTGTTTTCTCGCACCACTACCAACATTTTATAGAGTTTGTAAGAAGAAATCAACGGAAGGTTTCCAGTCAATTCCTTATGTGGCTGCACTCTTCAGTGCAATGCTTTGGATATTTTATGCCTATGTGAAGACAGGAGAAACACTTCTAATCACCATCAATGCATTCGGTTGTGTAATTGAGACTATTTACCTTGCCATTTATGTTGCTTACTGCCCCAAGAAAGCTAGGATGTCCACGTTGAGGATGATTGTGTTGATGAATTTTGGGGGATTTTGTGCCATTGTCGTCTTAACTCACGTCTTAGCAAAAGGAGAAGCCCGTTTTAAACTTCTCGGATGGATTTGTGTAGTTTTTGCTACTAGTGTTTTCGCAGCACCTTTAAGTATTATTGTAAGTGCATCTTATTTTTACTTTATAATGTTTAATTAA 492 0.3882 MSSHTHLSFAFGVLGNISSFVCFLAPLPTFYRVCKKKSTEGFQSIPYVAALFSAMLWIFYAYVKTGETLLITINAFGCVIETIYLAIYVAYCPKKARMSTLRMIVLMNFGGFCAIVVLTHVLAKGEARFKLLGWICVVFATSVFAAPLSIIVSASYFYFIMFN 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02625 163 Gene3D - 10 96 - -
Car05g02625 163 Pfam Sugar efflux transporter for intercellular exchange 10 96 IPR004316 GO:0016021
Car05g02625 163 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 6 151 - -
Car05g02625 163 PANTHER RAG1-ACTIVATING PROTEIN 1 6 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02625 Car-Chr5 71286887 71289086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02625 2 151 Miscellaneous Gene Families AT5G23660 62.667 6.85e-65 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02625 K15382 - gmx:100791106 285.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02625 05 71286887 71289086 Car05g02625 05 71286887 71289086 ECH
Car06g00575 06 5812645 5815708 Car05g02625 05 71286887 71289086 PCT