Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02624 ATGCAAACACTGCATCCTCCGGCGCCGGCGAACTCAGAAGGCGGCATCACCGGAGCTACCCTCGATCCTCCTCTGGTCAGAACTTATCGCGCTTGGAAAGGCAATAACGTATTTTTCCTTCGAGGGAGGCTTATATTTGGACCCGATGTGAAATCTATATTTACAACAGTGTTTCTTGTCGTTGCTCCTGTTGCTGTTTTCTGTGCTTTTGTTGCTTGGAAATTGTTGGATGATTTTCCTCATCACGCAGGATATTCAATTTTTATTGTAATTATTGTTCACACAATATTTGTTCTGATTGCCCTTGTACTGACCTCAGGAAGAGATCCGGGCATAGTGCCTCGCAATTCTTATCCTCCGGTGGTAGATGATTGTGATGGAAGTGTCAATGTCAACGGTGAACTAAACCCGCCGCAACATTTACCACGATTTAAGGAAGTAATTGTCAATGGAACAACTGTGAAAGTAAAATATTGTGATACCTGCATGCTATATAGACCTCCTCGCTGCTCTCATTGTTCAGTATGCGATAACTGCGTGGAGCGATTTGATCATCACTGCCCATGGGTGGGTCAGTGTATCGGATTGCGAAATTATCGGTTCTACTATATGTTTGTTTTCTCTGCAACCCTTCTTTGCCTGTATGTTCATGGCTTTTGTTGGGTCTACATCAAGAAGATCCAGAACTCAGAGGAGATAACAATTTGGAAAGCAATGATCAAAACCCCTGCTTCCATTGCACTAATAATATATTCCTTCATTTCTGTCTGGTTTGTTGGAGGGCTCACTGCATTCCATACATATCTAATCAGCACAAACCAGTCTACTTATGAAAATTTTAGATACCGGTATGACCGACAAGTCAACCCTTATAACAAAGGGGTAATTGAGAACTTCAAAGAAATATTCTGTTCTTCCATTCCTCGATCCAAAAACAATTTCAGGTCTAAGGTTCCAATTCCTAAAGAATCGTCAGAATCATCTAGAAGACAGGGTGTTGATACACTTATGATTAGAAAAACAGCAGGTGATCTGGAACTAGGGTCGCAAAGTTACAATGAGGTTGATGAGGCTGAAAAATATTATAAAGATGGGTTTGTCATTGATGAGGAATATGGAAAGGGTAGTGACTTAAGTGATACCTCCGTAGATTTAAGTAGAATGCTTCACACAGAACAGGGGCAGAGACAACTTGTTTCCTTTGTAAGGCAATCCATGTGGGAAAGAAGCAGCAGAAAAGAAGACATAACTCCTGAAGTTCTGGACCAGATACACGAAGCTGGGGAGTCAAAACAGATCACCGGTGATAGTAGTAATGAGCCTGGTGGCAGCTCAACAAAAATGGCTCCATAA 1353 0.4183 MQTLHPPAPANSEGGITGATLDPPLVRTYRAWKGNNVFFLRGRLIFGPDVKSIFTTVFLVVAPVAVFCAFVAWKLLDDFPHHAGYSIFIVIIVHTIFVLIALVLTSGRDPGIVPRNSYPPVVDDCDGSVNVNGELNPPQHLPRFKEVIVNGTTVKVKYCDTCMLYRPPRCSHCSVCDNCVERFDHHCPWVGQCIGLRNYRFYYMFVFSATLLCLYVHGFCWVYIKKIQNSEEITIWKAMIKTPASIALIIYSFISVWFVGGLTAFHTYLISTNQSTYENFRYRYDRQVNPYNKGVIENFKEIFCSSIPRSKNNFRSKVPIPKESSESSRRQGVDTLMIRKTAGDLELGSQSYNEVDEAEKYYKDGFVIDEEYGKGSDLSDTSVDLSRMLHTEQGQRQLVSFVRQSMWERSSRKEDITPEVLDQIHEAGESKQITGDSSNEPGGSSTKMAP 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02624 450 PANTHER S-ACYLTRANSFERASE 19 440 - -
Car05g02624 450 Pfam DHHC palmitoyltransferase 156 281 IPR001594 GO:0016409
Car05g02624 450 ProSiteProfiles DHHC domain profile. 157 207 - -
Car05g02624 450 MobiDBLite consensus disorder prediction 409 450 - -
Car05g02624 450 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 19 440 - -
Car05g02624 450 MobiDBLite consensus disorder prediction 430 450 - -
Car05g02624 450 MobiDBLite consensus disorder prediction 409 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02624 Car-Chr5 71261097 71264723 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02624 86 331 Lipid Metabolism Gene Families AT4G22750 26.199 1.16e-18 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02624 - - mtr:MTR_3g098840 687.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02624 05 71261097 71264723 Car05g02624 05 71261097 71264723 ECH