Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02595 atggaggaagataacgaatgcacgagcagagaagaacaagaagaagCATTGGTCGCTTTGATCGAACACCGTACACGTGAAGTCCGTAATCTCCGTAACCGTCTCTCCTATTACAAATCTCAGCTTGATGAAGCAGAAAAGAGGTTACGAGATTCAGAATTGAAATTGGCGCGTCTTCGAGGTCAAACTAATCATACAACTAAATCAGATGCAGATGATGGAATTGTAGCTGTGAAAACAGAGCGTAGATCAATTAGTCCAATTGATAGGAATAATGAACGTTTTTCCAAAAACAATAATCATCAATCTAATAAACCTCAACTTGTTATACCTGCTGTTACTCCGAAAACTTCGCACTTGTCCAAGTCCAATCCCAAAGCTTCTGCTTCTGAAATATCCACTCCCTCGGTTCATATTCCTTCCGTTAATGGAGGAAACTCTGATAAGTCTCGTAGAGACAAACAAAATCTTGAAGTTAAGGACAAAGGGACAAAAAGAAAATTTGAACAGAAAGAACACAAGGAGTTGACTCCTTTAATACGTAAGAGTACCACACTGAACTTAATACACTGCCAAACAAGCAACCACATCTCAAGTCAGCACAAGAGGAAATTGCGGAGCATTGCTTTGTGTCCTGTGGATGATCAGCGTTTTGTGACCAGTGCTTTGGATGGAGTGGTCAACTTGTGGCAAGTCCAAGCTAAGGGATCAGGAGCCTCTCTGCTTAACTCTACTGATTGTGCATCCCAAAAACAGAGGAGATGGCCAGAAGATATAGCTTGGCATCCGGAAGGAAACAGGCTCTTTTCAGTATATAGTGCTGATGGTGGAGACTCACAGATATCAGTTACTAATCTGAATAAATTTCAAGTGGGAGAACGTGTGAAGTTCTTAGAAGACAAGCCCCATGTTAAGGGAATTATCAATGGCATTGTTTTTATGCCTTGGGAAGAAACATGTTTTGTAACGGGTGGAAGTGACCATGCTGTTATACTTTGGAATGAGCTGGATGGTGAGAACAAGTGGAAGCCAAAAGCATTGCACAGGAATCTTCATTCTTCTGCTGTCATGGGTGTAGCTGGTATGCAGCAGAAGCCGATCGTGTTATCTGCAGGTGCAGACAGGAGAATATTTGGGTTTGATGTCAGTGTGGGAAGAGCAGATTTCAGTCATCAGATTGATAGTAAATGCATGAGTGTCCTTCCCAATCCGTGTGACTTCAACTTGTTTATGGTTCAAACAGGGACACATGAGAAGCAGCTTCGATTATTTGATATTAGATTGAGGCGGACAGAACTTCATGCTTTTGGGTGGAAACAAGAAAGCAGCGACTCCCAATCAGCTCTGATAAATCAGGCTTGGTCTCCTGATGGACTTTATATAACATCTGGTTCAGCGGATCCTGTGATTCACATTTTTGATATAAGATATAATGCCAACAAGCCTTCCCAATCTATAAGAGCTCACCAGAAACGAGTATTCAAAGCCATGTGGCTTCAGTCTATTCctcttctcatatccatttcatctgatctcaACATTGGGTTGCACAAGGTTTACTAG 1563 0.398 MEEDNECTSREEQEEALVALIEHRTREVRNLRNRLSYYKSQLDEAEKRLRDSELKLARLRGQTNHTTKSDADDGIVAVKTERRSISPIDRNNERFSKNNNHQSNKPQLVIPAVTPKTSHLSKSNPKASASEISTPSVHIPSVNGGNSDKSRRDKQNLEVKDKGTKRKFEQKEHKELTPLIRKSTTLNLIHCQTSNHISSQHKRKLRSIALCPVDDQRFVTSALDGVVNLWQVQAKGSGASLLNSTDCASQKQRRWPEDIAWHPEGNRLFSVYSADGGDSQISVTNLNKFQVGERVKFLEDKPHVKGIINGIVFMPWEETCFVTGGSDHAVILWNELDGENKWKPKALHRNLHSSAVMGVAGMQQKPIVLSAGADRRIFGFDVSVGRADFSHQIDSKCMSVLPNPCDFNLFMVQTGTHEKQLRLFDIRLRRTELHAFGWKQESSDSQSALINQAWSPDGLYITSGSADPVIHIFDIRYNANKPSQSIRAHQKRVFKAMWLQSIPLLISISSDLNIGLHKVY 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02595 520 MobiDBLite consensus disorder prediction 147 172 - -
Car05g02595 520 MobiDBLite consensus disorder prediction 60 172 - -
Car05g02595 520 Gene3D - 400 520 IPR015943 GO:0005515
Car05g02595 520 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 4 519 - -
Car05g02595 520 SUPERFAMILY WD40 repeat-like 203 516 IPR036322 GO:0005515
Car05g02595 520 MobiDBLite consensus disorder prediction 72 96 - -
Car05g02595 520 Gene3D - 113 399 IPR015943 GO:0005515
Car05g02595 520 MobiDBLite consensus disorder prediction 97 146 - -
Car05g02595 520 Pfam WD domain, G-beta repeat 451 474 IPR001680 GO:0005515
Car05g02595 520 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 4 519 - -
Car05g02595 520 Coils Coil 28 62 - -
Car05g02595 520 SMART WD40_4 291 334 IPR001680 GO:0005515
Car05g02595 520 SMART WD40_4 479 518 IPR001680 GO:0005515
Car05g02595 520 SMART WD40_4 185 231 IPR001680 GO:0005515
Car05g02595 520 SMART WD40_4 437 474 IPR001680 GO:0005515
Car05g02595 520 SMART WD40_4 341 381 IPR001680 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02595 - - gmx:102662882 805.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02595 05 70971246 70976334 Car05g02595 05 70971246 70976334 ECH