Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02586 ATGGATCACGTGCTTGTTGCTTTAGGGGAAACGAAAGAAGAAAGGGAAATTCGTATTCGAAGTTTGTTCAATTTCTTCGATGCAGGGAGTAATGGGTACTTGGATTATGGTCAGATAGAAACAGGGTTATCGGCATTGCAAATTCCAGCGGAGTACAAGTACGCGAGGGAACTTTTCAAGGTTTGTGATTCCAATAGTGATGGTAGGGTTGATTATAACGAGTTTCGTAGATATATGGATGATAAGGAATTGGAGCTTTATTGCATCTTTCAAGCCATTGATGTTGAACATAATGGTAGTATTCTCCCTGAAGAGCTTTGGGATGCACTTGATAGGGCTGGAATTGAAATGAATGACGAGGAGCTTGCTCGCTTCGTGGAGCATGTGGACAAGGATAATAATGGAACTATCACTTTTGAAGAATGGAGAGATTTTCTTCTACTTTACCCTCACGAAGCAACGATTGAAAATATATATCACCATTGGGAGAGGGTGTACCATGTAGACATTGGAGAGCAAGCTGTCATTCCCGAAGACATTAGCAAGCACGCTTACCGGAGCAAGTATTTTATCGCTGGTGGAATAGCAGGAGCTACTTCGCGTACTGCCACTGCTCCTCTTGATCGTCTGAAGGTTGTCTTGCAAGTTCAGACTACACATTCTTCTGCTATGTCAGCAGTAGCAAAGATATGGAAGCAAGATAGTTTAAAAGGGTTTTTCCGAGGTAATGGATTGAATATTGTGAAAGTATCACCAGAAAGTGCTATCAAGTTTTATGCTTTTGAAATGCTGAAAAATGTAATTGGAGATGTGGAAGGCAACAAGTCTGATATCGGTGCTGCCGGGCGGCTTGTTGCAGGCGGCGTGGCCGGTGGAATTGCACAGACTGCAATCTATCCATTGGATCTTATCAAAACTAGGTTACAAACTTGTGCCTCTGAAGGTGGAAAGGCTCCTAAAATTGGAACACTCACAAAGAATATTTGGATTCAAGAGGGTCCACGAGCTTTTTACCGGGGGCTTCTTCCATCTGTGATTGGCATGATTCCTTATGCTGGTATTGATCTCGCGGTTTATGATACCTTGAAAGATATGTCCAAGAGATATATTATTCATGATAATGAACCTGGTCCTCTAATACAACTTGGATGTGGAACAATTTCTGGAACCCTTGGAGCTACTTGTGTCTATCCACTGCAGGTTATTCGTACTAGGCTGCAGGCACAACCTTCCAACGCCTCAGATGCTTACAAGGGGATGTTTGATGCATTTTTTAGAACTTTTCAGCATGAAGGCTTTCGAGATGCTAAAATACAGTGGCGGCGGATCTTTGTTACGCGGCTGGATCCAGCTTCTCGATGA 1362 0.4288 MDHVLVALGETKEEREIRIRSLFNFFDAGSNGYLDYGQIETGLSALQIPAEYKYARELFKVCDSNSDGRVDYNEFRRYMDDKELELYCIFQAIDVEHNGSILPEELWDALDRAGIEMNDEELARFVEHVDKDNNGTITFEEWRDFLLLYPHEATIENIYHHWERVYHVDIGEQAVIPEDISKHAYRSKYFIAGGIAGATSRTATAPLDRLKVVLQVQTTHSSAMSAVAKIWKQDSLKGFFRGNGLNIVKVSPESAIKFYAFEMLKNVIGDVEGNKSDIGAAGRLVAGGVAGGIAQTAIYPLDLIKTRLQTCASEGGKAPKIGTLTKNIWIQEGPRAFYRGLLPSVIGMIPYAGIDLAVYDTLKDMSKRYIIHDNEPGPLIQLGCGTISGTLGATCVYPLQVIRTRLQAQPSNASDAYKGMFDAFFRTFQHEGFRDAKIQWRRIFVTRLDPASR 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02586 453 SUPERFAMILY EF-hand 9 182 IPR011992 -
Car05g02586 453 ProSiteProfiles Solute carrier (Solcar) repeat profile. 278 365 IPR018108 -
Car05g02586 453 Gene3D - 97 172 - -
Car05g02586 453 CDD EFh 85 146 IPR002048 GO:0005509
Car05g02586 453 PANTHER SOLUTE CARRIER FAMILY 25 35 434 - -
Car05g02586 453 Pfam Mitochondrial carrier protein 277 366 IPR018108 -
Car05g02586 453 Pfam Mitochondrial carrier protein 378 434 IPR018108 -
Car05g02586 453 Pfam Mitochondrial carrier protein 188 269 IPR018108 -
Car05g02586 453 SUPERFAMILY Mitochondrial carrier 184 434 IPR023395 -
Car05g02586 453 ProSiteProfiles EF-hand calcium-binding domain profile. 14 49 IPR002048 GO:0005509
Car05g02586 453 SMART efh_1 121 149 IPR002048 GO:0005509
Car05g02586 453 SMART efh_1 85 113 IPR002048 GO:0005509
Car05g02586 453 SMART efh_1 18 46 IPR002048 GO:0005509
Car05g02586 453 SMART efh_1 54 82 IPR002048 GO:0005509
Car05g02586 453 Gene3D - 2 87 - -
Car05g02586 453 ProSiteProfiles Solute carrier (Solcar) repeat profile. 184 267 IPR018108 -
Car05g02586 453 ProSiteProfiles Solute carrier (Solcar) repeat profile. 376 453 IPR018108 -
Car05g02586 453 ProSiteProfiles EF-hand calcium-binding domain profile. 50 85 IPR002048 GO:0005509
Car05g02586 453 Pfam EF-hand domain pair 55 81 IPR002048 GO:0005509
Car05g02586 453 Gene3D Mitochondrial carrier domain 181 436 IPR023395 -
Car05g02586 453 ProSiteProfiles EF-hand calcium-binding domain profile. 117 152 IPR002048 GO:0005509
Car05g02586 453 ProSiteProfiles EF-hand calcium-binding domain profile. 89 116 IPR002048 GO:0005509
Car05g02586 453 ProSitePatterns EF-hand calcium-binding domain. 130 142 IPR018247 -
Car05g02586 453 ProSitePatterns EF-hand calcium-binding domain. 63 75 IPR018247 -
Car05g02586 453 Pfam EF-hand domain pair 85 144 IPR002048 GO:0005509
Car05g02586 453 PRINTS Mitochondrial carrier protein signature 242 262 IPR002067 GO:0055085
Car05g02586 453 PRINTS Mitochondrial carrier protein signature 202 216 IPR002067 GO:0055085
Car05g02586 453 PRINTS Mitochondrial carrier protein signature 293 311 IPR002067 GO:0055085
Car05g02586 453 PRINTS Mitochondrial carrier protein signature 338 356 IPR002067 GO:0055085
Car05g02586 453 PRINTS Mitochondrial carrier protein signature 385 407 IPR002067 GO:0055085
Car05g02586 453 PRINTS Mitochondrial carrier protein signature 189 202 IPR002067 GO:0055085
Car05g02586 453 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 35 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02586 Car-Chr5 70884521 70888030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02586 1 434 EF-hand Containing Proteins AT5G51050 71.330 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02586 K14684 - gmx:100801703 729.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02586 05 70884521 70888030 Car05g02586 05 70884521 70888030 ECH