Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02560 ATGAACTTTCCAAGTCCAccttatgccacgtcatcaccttctacttcttcctcatcctcatcctattcactcaATCATGCTTCTCCTAATTTCAACCGTTCTATGCTGGTGCCACAGGCAATTTGTACCTCTCAAAAAAAGTCCTTCTGCTCTGGAGCCCAATTGGAGGCTTCTGTTAACTCTAATACAGTGAAAAATCACTTATTTTTCCCGCAGCGATCTGAAGCGCAACCATTGGTTGCTAACCAATCACTTAACAAACACTTGTTCTCTGTAGGAGCTTTAGTAACTCCAACAGCACAAGATGTTGCTGATACAAATGTTATTGGTGATGATAAGATTGGAGTGTTATTGCTAAACCTTGGAGGTCCAGAGACTCTAGATGATGTGCAGCCTTTTTTATTTAACCTTTTTGCTGACCCGGATATTATACGATTGCCACGTATATGTAGATTTCTTCAAAAGCCATTGGCCCAATTTGTATCTGTTCTAAGGGCCCCAAAGAGCAGAGAAGGCTATGCTTCAATTGGCGGTGGTTCTCCTCTTAGACGTATAACTGATGAACAGGCTGAAGAGTTGAAGAAATCTCTTTTGGTAAAGAATGTCCCAGCTGAAGTGTATGTTGGCATGCGTTACTGGCATCCATTCACCGAGGAAGCTATTGAACAGATTAAAAGGGATGGAGTTACAAAGCTGGTTGTTCTCCCACTCTATCCACAATTTTCAATATCAACCAGTGGTTCGAGCCTACGTCTACTGGAGAGTATATTCCGAGAGGATGAGTATCTAGTCAACATGCAGCACACAGTTTTACCTTCATGGTATCAACGTGAAGGATACATCAAGGCCATGTCAAACTTAATTGAAAAAGAGCTGAAGAGTTTTGACTGCCCTCAGGAGGTCATGATATTCTTTAGTGCACATGGGGTACCTCTTGCTTATGTGGAAGAGGCTGGTGATCCATACAAGGCAGAGATGGAGGAATGTGTGGACTTGATCATGGAAGAACTTGAGACAAGAAAGATAACTAATCCCTTCACCCTTGCCTATCAGAGTAGAGTTGGACCAGTGGAATGGTTAAAGCCCTATACAGATGAGACAATAGTTGAACTTGGAAAAAAGGGAGTGAAAAGTCTTCTGGCTGTTCCAATTAGCTTTGTCAGTGAACATATTGAAACTCTAGAAGAAATTGATGTTGAATACAAAGAGTTGGCTCTACAATCTGGTATAGAAAAGTGGGGCCGCGTTCCTGCTCTAGGATGTGAACCCGCCTTTATTTCTGATTTGGCAGATGCTGTTATTGAAAGTCTCCCGTATGTTGGTGCTATGGCAGTTTCAAACCTTGAAGCTCGACAGTCTTTGGTTCCCCTTGGAAGCGTAGAATCGTTATTGGCAGCTTATGACTCGCAACGTCGGGAGTTGCCATCACCAGTGATAGTGTGGGAATGGGGTTGGACAAAAAGTGCTGAAACTTGGAATGGAAGAGCAGCTATGTTGGCTGTGTTGCTTCTTTTGTTTTTTGAAGTCACTACTCCTGATAGTTTTTTTCACCAGTGGGGAATATTATTGCCCTCATCTAGGTGA 1584 0.411 MNFPSPPYATSSPSTSSSSSSYSLNHASPNFNRSMLVPQAICTSQKKSFCSGAQLEASVNSNTVKNHLFFPQRSEAQPLVANQSLNKHLFSVGALVTPTAQDVADTNVIGDDKIGVLLLNLGGPETLDDVQPFLFNLFADPDIIRLPRICRFLQKPLAQFVSVLRAPKSREGYASIGGGSPLRRITDEQAEELKKSLLVKNVPAEVYVGMRYWHPFTEEAIEQIKRDGVTKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVLPSWYQREGYIKAMSNLIEKELKSFDCPQEVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELETRKITNPFTLAYQSRVGPVEWLKPYTDETIVELGKKGVKSLLAVPISFVSEHIETLEEIDVEYKELALQSGIEKWGRVPALGCEPAFISDLADAVIESLPYVGAMAVSNLEARQSLVPLGSVESLLAAYDSQRRELPSPVIVWEWGWTKSAETWNGRAAMLAVLLLLFFEVTTPDSFFHQWGILLPSSR 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02560 527 Hamap Coproporphyrin III ferrochelatase [cpfC]. 112 437 IPR001015 GO:0004325|GO:0006783
Car05g02560 527 CDD Ferrochelatase_N 114 276 IPR033659 -
Car05g02560 527 SUPERFAMILY Chelatase 112 443 - -
Car05g02560 527 Pfam Ferrochelatase 113 436 IPR001015 GO:0004325|GO:0006783
Car05g02560 527 ProSitePatterns Ferrochelatase signature. 303 324 IPR019772 GO:0004325|GO:0006783
Car05g02560 527 SUPERFAMILY Chlorophyll a-b binding protein 481 522 - -
Car05g02560 527 MobiDBLite consensus disorder prediction 1 24 - -
Car05g02560 527 PANTHER FERROCHELATASE-1, CHLOROPLASTIC/MITOCHONDRIAL 44 447 - -
Car05g02560 527 CDD Ferrochelatase_C 282 420 IPR033644 -
Car05g02560 527 Gene3D - 113 436 - -
Car05g02560 527 TIGRFAM hemH: ferrochelatase 112 437 IPR001015 GO:0004325|GO:0006783
Car05g02560 527 Gene3D - 275 418 - -
Car05g02560 527 PANTHER FERROCHELATASE 44 447 IPR001015 GO:0004325|GO:0006783
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02560 Car-Chr5 70679747 70684375 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02560 K01772 - gmx:100785669 837.025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00633 06 6373849 6378778 Car05g02560 05 70679747 70684375 PCT