Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02559 ATGGCATCTGAGTTAGTCAATGCTGCAACAAGCGAGAAATTGGCTGAAACTGATTGGGCAAAAAATATTGAAATATGTGAGTTGGTTGCACGTGATAGAAGGCAAGCTAGAGATGTTGCTAAAGCTATCAAGAAGAGACTGGGTAGCAAACACCCCAATACTCAACTTTATGCTGTCATGTTGCTGGAGATATTGATGAACAATACTGGAGAGCATATTCATGAGCAGGTGATTGATATCGGAATTATTCCTATTCTTGTGAAAATGGTGAAGAAAAAGTCTGATTTGCCTGTGAGGGAGAGGATATTTCTCCTACTAGATGCCACACAATCATCTCTTGGTGGTGCTTCTGGAAAATTTCCCCAGTATTATAATGCATATTACGATTTAGTGAATGCTGGAGTGCAGTTTCCTCCAAGTGCTCAAGTTGTCCAACCAAATCATGCTAGTTCACAACCTACTAGGACTGTTAGTGTACCAAACAGGGAGGAGGCCTCACCTAGACATGAAGCGGTGGTACCACAAGCAGAATCCCAGACTGTCCCTGAATCTAGCATCATTCAAAAGGCTAGTAATGCATTGGAAGTTTTAAAAGAAGTTCTTGATGCTGTTGATGCTCAATATCCTCAGGGAGCAAGTGATGAATTCACCCTTGACCTTGTAGAACAATGTTCGTTTCAGAAGCAAAGGGTAATGCATCTTGTGATGGCTTCTCGAGATGAGAAGATAGTTTCTCGAGCAATTGAATTAAACGAACAGCTTCAGAAAGTTCTTGCAAGACATGATGACCTTGTTTCTGGCAGAGCTTCGACAACCGCTAGTGAACCGCTTCAGAAAGTTCTTCCAAGACACAATGACATTGTATCTGGCAGAGCTACAACAACTGCTACTAATACTCGTTTTAACCATGAAGAATCAGACGAGGAAGAGGAGCCTGAACAGTTAGTACGAAGGTGCCGCCTATCTTGTTCTCGGAACTCGATAAGTTCCTTATTGAATGATAACCCTATTTTGAATGTTAATTCATCTCAGAATGTCTAA 1041 0.414 MASELVNAATSEKLAETDWAKNIEICELVARDRRQARDVAKAIKKRLGSKHPNTQLYAVMLLEILMNNTGEHIHEQVIDIGIIPILVKMVKKKSDLPVRERIFLLLDATQSSLGGASGKFPQYYNAYYDLVNAGVQFPPSAQVVQPNHASSQPTRTVSVPNREEASPRHEAVVPQAESQTVPESSIIQKASNALEVLKEVLDAVDAQYPQGASDEFTLDLVEQCSFQKQRVMHLVMASRDEKIVSRAIELNEQLQKVLARHDDLVSGRASTTASEPLQKVLPRHNDIVSGRATTTATNTRFNHEESDEEEEPEQLVRRCRLSCSRNSISSLLNDNPILNVNSSQNV 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02559 346 MobiDBLite consensus disorder prediction 143 168 - -
Car05g02559 346 MobiDBLite consensus disorder prediction 291 313 - -
Car05g02559 346 PANTHER TOM1-LIKE PROTEIN 275 321 IPR044836 GO:0035091|GO:0043130|GO:0043328
Car05g02559 346 PANTHER TOM1-LIKE PROTEIN 1 273 IPR044836 GO:0035091|GO:0043130|GO:0043328
Car05g02559 346 SUPERFAMILY ENTH/VHS domain 4 139 IPR008942 -
Car05g02559 346 MobiDBLite consensus disorder prediction 143 161 - -
Car05g02559 346 Gene3D - 1 136 IPR008942 -
Car05g02559 346 ProSiteProfiles GAT domain profile. 178 266 IPR004152 GO:0035091|GO:0043130
Car05g02559 346 Coils Coil 187 207 - -
Car05g02559 346 Pfam GAT domain 192 267 IPR004152 GO:0035091|GO:0043130
Car05g02559 346 CDD VHS 2 130 - -
Car05g02559 346 PANTHER ENTH/VHS/GAT FAMILY PROTEIN 275 321 - -
Car05g02559 346 PANTHER ENTH/VHS/GAT FAMILY PROTEIN 1 273 - -
Car05g02559 346 Pfam VHS domain 4 108 IPR002014 GO:0035091|GO:0043130
Car05g02559 346 Gene3D - 176 275 IPR038425 -
Car05g02559 346 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Car05g02559 346 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Car05g02559 346 SUPERFAMILY GAT-like domain 155 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02559 Car-Chr5 70673779 70678816 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02559 - - mtr:MTR_3g097280 499.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00634 06 6379275 6380331 Car05g02559 05 70673779 70678816 PCT