Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02558 ATGCAATCCTCTCGCACCGCTCTAAACGACGACGAACCGGCCGGTTCATCAACGAACCACATCACCCCCGTCTTGCGCTCTCTCTCAACCTGCAACCGACCCGGTCGAACCTCCTCATCAAACCGCGCGGTTCAACGATCCGCCTCTGCCAGGTTGGCTCGTCAAAATACCACACGTGAGGTCATGCTTAATGACCTCGTCGGTAACGGAATCTCCGGTATATTATATAAATGGGTTAATTACGGCAGAGGGTGGCGTCCTCGTTGGTTCAGCCTCCATGACGGTGTTCTCTCTTATTACAAAATTCACGGTCCTGATAAACTCATTCTTAATCGTGAACTTGAAACAAGATCCAAAGTTATTGGTGATGAATCCCTCCGCCGTATCGCTACCAACCGTCATTGTCCTTCCCGCCACCGCAAACCTGTCGGTGAAATCCACCTCATGGTGTGTTCGGTGCGTGAGAACAAATCAGATGAGAGGAGGTTTGGTATATGCACAGGAACAAAGAAGAGGATACATTTAAGAGCAGAGAGTAAAGAGGACAGAACAAAGTGGATGGATGCAATGAAAGCAGTTAAGGATATGTATCCACGATTACCCTCCACTACTGAAATCATGTCTCCCTCACTTTCAGTGATAACTTCCACTGACAAGTTGAGGCAGAGACTTTTACAAGAAGGTCTGAATGAGGTTGCTATTCGTGAATGTGAGGATATCATCAGAGCTGAACTATTTCAATTGCACACTTACATTGTAGCTCTCAAGCAGAAACAAGTGCTACTCGTGGACACACTTCGTAATTTAGAGACAGAGAAGGTTGACTTGGAGAACACGCTTGTTGAAGACCAGAGACAGTCTAAGGATGAAGGGGATCCTTATCTATCAACACATGAAAAGTATAGTGATGGAAGTGGAAGTGAATATTCAGATGAGCATGATAGGAATGATAATTTTGAAGATGAGCACGATGCATTCTTTGATACATACGAAATTCTCTCAACAAGTTCAATGAGAAGTAATGGCTCATCTGATTATTTGAGATCCAACCATGATTCTGAATGTGAGGACACATCGTCCAGTCCAACAAGAAAATGTGATTCAAATTCACCAATTGGACTTAACTATCCTCATATCAATAGAAGAAAAAAATTGCCTGATCCAATTGAGAAAGAAACTGGAGTTAGTCTATGGTCAATGATAAAAGACAACATCGGAAAAGATCTTACAAAAGTTTGTCTTCCGGTTTATTTTAATGAGCCCATCTCCTCATTACAGAAATGTTTTGAAGATTTGGAGTACTCTCACCTCTTAGATCAAGCCAGTAAAGCGGACAGTCTAATGAGGGTACTATATGTGGCTGCATTTGCAGTTTCAGGGTATGCTAATACTAGTGGTAGAAGTTGCAAACCATTTAATCCATTATTGGGTGAAACATATGAGGCAGATTATCCAGATAAAGGCATACGCTTTATCTCTGAGAAGGTCAGTCATCACCCTATGGTTGTAGCATGTCATTGTGAGGGTCGTGGGTGGAAATTTTGGGGTGATAGCATTTTAAAAAGTAAATTTTGGGGGCGTTCAATTCAGCTTGATCCTATTGGTTTATTGACTGTGGAATTTGATGATGGAGAAGTCTTCTATTGGAGCAAGGTAACAACATCCATTTACAACCTAATTTTAGGAAAACTCTACTGTGACCATTATGGTACAATGAAGGTAGAGGGGAATCGTGAGTATTCATGTAAGATCAAATTCAAGGAGCAATCAATCATTGATAAAAATCCTCATCAGTTTTGTTGTAGGTTCACGGCATAG 1818 0.4186 MQSSRTALNDDEPAGSSTNHITPVLRSLSTCNRPGRTSSSNRAVQRSASARLARQNTTREVMLNDLVGNGISGILYKWVNYGRGWRPRWFSLHDGVLSYYKIHGPDKLILNRELETRSKVIGDESLRRIATNRHCPSRHRKPVGEIHLMVCSVRENKSDERRFGICTGTKKRIHLRAESKEDRTKWMDAMKAVKDMYPRLPSTTEIMSPSLSVITSTDKLRQRLLQEGLNEVAIRECEDIIRAELFQLHTYIVALKQKQVLLVDTLRNLETEKVDLENTLVEDQRQSKDEGDPYLSTHEKYSDGSGSEYSDEHDRNDNFEDEHDAFFDTYEILSTSSMRSNGSSDYLRSNHDSECEDTSSSPTRKCDSNSPIGLNYPHINRRKKLPDPIEKETGVSLWSMIKDNIGKDLTKVCLPVYFNEPISSLQKCFEDLEYSHLLDQASKADSLMRVLYVAAFAVSGYANTSGRSCKPFNPLLGETYEADYPDKGIRFISEKVSHHPMVVACHCEGRGWKFWGDSILKSKFWGRSIQLDPIGLLTVEFDDGEVFYWSKVTTSIYNLILGKLYCDHYGTMKVEGNREYSCKIKFKEQSIIDKNPHQFCCRFTA 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02558 605 Coils Coil 266 286 - -
Car05g02558 605 SUPERFAMILY PH domain-like 71 212 - -
Car05g02558 605 MobiDBLite consensus disorder prediction 1 52 - -
Car05g02558 605 Gene3D - 478 605 - -
Car05g02558 605 SUPERFAMILY Oxysterol-binding protein-like 391 601 IPR037239 -
Car05g02558 605 MobiDBLite consensus disorder prediction 341 372 - -
Car05g02558 605 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 23 599 IPR000648 GO:0008289
Car05g02558 605 MobiDBLite consensus disorder prediction 280 297 - -
Car05g02558 605 MobiDBLite consensus disorder prediction 304 318 - -
Car05g02558 605 Pfam Oxysterol-binding protein 396 599 IPR000648 GO:0008289
Car05g02558 605 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 1C 23 599 - -
Car05g02558 605 ProSiteProfiles PH domain profile. 68 195 IPR001849 -
Car05g02558 605 Pfam PH domain 71 193 IPR001849 -
Car05g02558 605 Gene3D - 69 197 IPR011993 -
Car05g02558 605 MobiDBLite consensus disorder prediction 280 318 - -
Car05g02558 605 SMART PH_update 69 197 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02558 Car-Chr5 70662601 70668046 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02558 K20456 - gmx:100781218 862.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02558 05 70662601 70668046 Car05g02558 05 70662601 70668046 ECH