Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02542 ATGGGTAGATTGTACTCAAAGTTGCATGCATCATCACTTGTGAGTCTATGTAAACAAAGGAAGGATATTATTAAAGCCGCCAAGTATTGTAGGTATGATTTAGTTACATCTTTTGATTTATACTTAGACTCTCTTTTCCAGCTAGGTAATGCTCTCAACCAATATGTTGAACTAGAGTTTCTGATTTTTGATTATTCTTGTATTAAATTGGAACTTTCCTCCTCTGACATTGGTTTTGATTTGCATCACCTTCATTGTGATGATTTGGAATTTTCCTCCTCTGACATTGATTTTGATTTGCATCACCTTCATTGtgatgatgatgatgaggaggaggaagaagaACTAATTAGTAGCATTGATTTTAGCTCTGAAGTGATGAATGAATCAATTTACACTTGTAAGCTCCATGCTTCTGATAGAAACAACATGAGAAATAAAGGGAAGTCAACATTTGAGTTTGAGAATACAACAAGTCAAAAACCTTATAATTTTTACTCTAATATCAATCCAAAACATAGAAGCTATGATGAGAACATTCATTTGCATATGTCACATGAAGATTTTGGTCACAGTAAGCATAGTCAAAGGAATGAAATTCCACAAAGGGTTAATAATAGGTATGATTATGAACATTATGGAAACAATCCTTTTCATATGGACATGTCACATGAAGATTTTGGACACCATGATCATAGTCAAAGGAAGGAAACTTCACAAATAAGGGTTCATAGGTATGAACATTATGGTTCCAAGCCTTATCCAATGATTGTATCACCTAGTCCAGTTTTTGAGTCACATAATCATGAAACTAGTCGCCAAAATAATGCTcctccaccgctgccgccgcctcctcctccaccgccgcctcAATCAGAAGGGATTCCTGATTTAGAAGACAAAACTGAACTAAGTTCGACCGCGTCCACTTTTTATAATCATAATGGAATGGAAAATGGGAATAGACATCATTGCTCAAGTAATGGAACTTTCAGCGTTGGAGGGATAAATTGTAATCAAGATTCATTTTCAACCACTGAGGAAAGTTTCAAGGGTAACTTGGAGCCTAAGGCAACAATACAGGACATTGAATCTTTGAGAACTAGTGGTGTTTGTATTACTACACCAGATTCTAGTAGCAGAATGAGTCTAAAGGAGGCAGTGCTAGAAATAAATAACGATTTCAAACATATATGTGATTGTGGAAGAGAATTATCATCGGTTGTCGAGGCAGGAAAGCTACCATATTATTCTCAAAGCACCAAATTAAGGGCATTTGCCTGTTGTGTTCTGGCGCAGATATTCCCTTTCATACCCTCGTTTTTGTACCCTTCATACATGTCATACCAACAAACTCCTAGAACAAAGATGTTGTTGTCCAACGATAAGATGCAAAACAGTCAAGAACTTACAAAATCAGGTGACCTTTCATCAACTTTGGAGCAGCTTCATTTGTGGGAAAAGAAACTTTATTCAGAAGTGTTGACTGAAGAAAAACATAGAATTCTCTATGATAAGCAATGTAAGAGGCTAAAAGAATTGGATGGGAAAGGTTCTGAGTCAAATAAGGTTGATGATACTCTTGCTTCTATCAAACTTCTACAATCAGAAATTAGTGTAGTTATTGCATCAATCGGTGTGATATCAAGAGAAATACATGAGCTAACAGATGATAAGCTGCTTCCGGAACTATATAAATTGATTGATGGCTTACTTGGATTGTGGAAGATCATGAGTACATGTCACCATAAACAATTCCAAGCTATCAGCAAAGCCATAAGTCATGTACATATAGTAGATCCTTTGAAAAAGAATAAGTCAAGCTCAAAAGCTACTTTGAAATTGAAAAAAGTGGTTTTGAACTGGGGTAAGTGCTTTAGTAATTTCATCAAAAAACAGAAGACCCTAGTGAAACACTTGAATGATTGGCTACAAAGGTGCAGTCTCAAAGAAACAGAAGAAAATGAAGATAGGATTAGTACTTTATTGCCAAGTGATTTAGAAGCTCCTCCTATTTTTAAAGTTTGTAATAATTGGTACAATGCAATTAACAAGGTTTCAGAAATTGAAGTCTCTAAAGCTATTAACAATTTTGCATCAAACTTGCACCAATTCTATCAGAAGCTAAAAGAAGAACATGCATTGAAAGTTAGAGTGAAACACTTTTTTAAGGATTATAAGCAAAGGTTTAGATCCTATTGCAAGAAGAATTACATCAACTCACAACAATATTACTCTTTTATCAAAATGAAGGCCACAGACGATTTTGAAGAAAATGAGATTCCACTGTTGAGAGTATCTAATGACAACTTAGCAGTTTCAAGACTAAGATTGATTGAAGAGAGAAAGAAACACCAACAATTTGTCAAACATGTTAATGATGCTGCTTCAAGTTGTTTACAAGAGGGTTTGACTCCAATTTTTGAGGCTTTGTTGAGCTTTAGTTTGGAAAATCTTAATATTTATGAGCAGCTAAAATTTCCAAATGGTGGACCTCATGAGCAACAGAATATTTCATATTGTAGCATCCAGCAGTGTCCAGTGCCCAATGCATCAGTGATAGCAATTACAAAAAGTGAGGTCCACAAGGATGAAAGCAAATCAACCGAATATGAGGTTATGAATTGTCCTGAATGA 2637 0.3383 MGRLYSKLHASSLVSLCKQRKDIIKAAKYCRYDLVTSFDLYLDSLFQLGNALNQYVELEFLIFDYSCIKLELSSSDIGFDLHHLHCDDLEFSSSDIDFDLHHLHCDDDDEEEEEELISSIDFSSEVMNESIYTCKLHASDRNNMRNKGKSTFEFENTTSQKPYNFYSNINPKHRSYDENIHLHMSHEDFGHSKHSQRNEIPQRVNNRYDYEHYGNNPFHMDMSHEDFGHHDHSQRKETSQIRVHRYEHYGSKPYPMIVSPSPVFESHNHETSRQNNAPPPLPPPPPPPPPQSEGIPDLEDKTELSSTASTFYNHNGMENGNRHHCSSNGTFSVGGINCNQDSFSTTEESFKGNLEPKATIQDIESLRTSGVCITTPDSSSRMSLKEAVLEINNDFKHICDCGRELSSVVEAGKLPYYSQSTKLRAFACCVLAQIFPFIPSFLYPSYMSYQQTPRTKMLLSNDKMQNSQELTKSGDLSSTLEQLHLWEKKLYSEVLTEEKHRILYDKQCKRLKELDGKGSESNKVDDTLASIKLLQSEISVVIASIGVISREIHELTDDKLLPELYKLIDGLLGLWKIMSTCHHKQFQAISKAISHVHIVDPLKKNKSSSKATLKLKKVVLNWGKCFSNFIKKQKTLVKHLNDWLQRCSLKETEENEDRISTLLPSDLEAPPIFKVCNNWYNAINKVSEIEVSKAINNFASNLHQFYQKLKEEHALKVRVKHFFKDYKQRFRSYCKKNYINSQQYYSFIKMKATDDFEENEIPLLRVSNDNLAVSRLRLIEERKKHQQFVKHVNDAASSCLQEGLTPIFEALLSFSLENLNIYEQLKFPNGGPHEQQNISYCSIQQCPVPNASVIAITKSEVHKDESKSTEYEVMNCPE 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02542 878 PANTHER BNAA10G08300D PROTEIN 1 830 - -
Car05g02542 878 MobiDBLite consensus disorder prediction 276 294 - -
Car05g02542 878 MobiDBLite consensus disorder prediction 252 303 - -
Car05g02542 878 Pfam Protein of unknown function (DUF630) 1 58 IPR006868 -
Car05g02542 878 MobiDBLite consensus disorder prediction 215 239 - -
Car05g02542 878 MobiDBLite consensus disorder prediction 218 239 - -
Car05g02542 878 PANTHER UNCHARACTERIZED 1 830 - -
Car05g02542 878 SUPERFAMILY Formin homology 2 domain (FH2 domain) 279 529 - -
Car05g02542 878 Pfam Protein of unknown function (DUF632) 384 703 IPR006867 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02542 Car-Chr5 70497948 70502619 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02542 473 718 Acyl Lipid Metabolism Gene Families AT2G27090 32.932 2.99e-34 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02542 - - cam:101505796 1640.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02542 05 70497948 70502619 Car05g02542 05 70497948 70502619 ECH