Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02533 ATGGTAGAAAACACTTCCAGAACCAACCTTAGCTACCGTGGGGATTTTGTTGGCATCGAGGAGGACGCCATAGATTGTGCACCTGTAGAAACCAACTCCAAATGCTACGACGACGATGGCCGAGCTAAACGAACGGGAAACGTTTGGACTACATGCTCCCACATAATAACAGCTGTGATAGGATCTGGGGTGCTCTCCTTAGCCTGGTCCATAGCTCAGATGGGTTGGATTGCTGGTCCTGCGACCATGATATTTTTCAGTGTCATCACTTTGTATACTTCATCATTTCTTGCTGATTGTTATCGTTGTGGCGACACCGAATTTGGAAAGAGAAACTATACTTTCATTGATGCAGTTCGCAATATTCTTGGTGGGCCCAGTGTTAAGATTTGTGGGATAGTTCAGTACTTGAATCTTTTTGGAAGTGCAATAGGGTACAATATTGCAGCTGCTATGAGCCTGATGGAAATCAGAAAGTCTTACTGTATCCATACCTCTGGTGGAGAGGACTCATGTCACATTTCAGGCAACCCATACATGATAGCTTTTGGCGTGGCACAACTTTTCTTTTCTCAAATTCCAGATTTTCATAACATGTGGTGGCTCTCGATAGTTGCTGCAGTCATGTCTTTCTTCTATTCCACAATTGCTCTCGCTCTTGGAATTTCCAAAGTTGCAGAAACGGGTATGGTCAAGGGTAGCCTCACAGGAATAAGCATTGGAGCTGTGACCGAGGCCCAAAAAGTATGGGGGATTTTCCAAGGTCTTGGAAACATTGCCTTCGCATATTCATATTCTTTCATTCTCCTTGAAATTCAGGACACCATCAAATCTCCCCCAACCGAAGAAAAAGCCATGAAGAAAGCTGCAAAGCTAAGTATTGCAGTAACTACAACATTTTATTTGCTCTGTGGCTGCATGGGCTATGCTGCTTTTGGAGACGATGCACCAGGTAACCTGCTTGCCGGATTTGGTGTCTCAAAAGTATATTGGATTATAGATATTGCTAATGCAGCTATTGTAATTCACCTTTTCGGAGCATACCAAGTGTATGCCCAACCCCTCTTTGCCTTCGTTGAGAAAGAGGCAGCAAAAAAATGGCCCAAAATTGACAAAGAATTCAAAGTTAAAATTCCTGGTTTGCCAGTCTACAATCAAAACATATTTATGTTGGTTTGGAGGACAGTGTTTGTTATCTTCACCACTCTCATAGCAATGTTGATTCCATTTTTCAATGATATTTTGGGTGTGATTGGAGCATTAGGCTTTTGGCCGTTATCTGTTTACTTTCCTGTAGAGATGTACATCGTACAGAAGAGGATCCCAAAATGGAGTAGGAAATGGATTGTTCTGGAAATGATGAGTTCTTTCTGCCTCTTAGTATCTATTGTGGCTGGTCTTGGCTCATCGATCGGTGTTTGGATTGACTTGCAGAAATACAAACCATTCAGCTTAGAAAACTAA 1464 0.4235 MVENTSRTNLSYRGDFVGIEEDAIDCAPVETNSKCYDDDGRAKRTGNVWTTCSHIITAVIGSGVLSLAWSIAQMGWIAGPATMIFFSVITLYTSSFLADCYRCGDTEFGKRNYTFIDAVRNILGGPSVKICGIVQYLNLFGSAIGYNIAAAMSLMEIRKSYCIHTSGGEDSCHISGNPYMIAFGVAQLFFSQIPDFHNMWWLSIVAAVMSFFYSTIALALGISKVAETGMVKGSLTGISIGAVTEAQKVWGIFQGLGNIAFAYSYSFILLEIQDTIKSPPTEEKAMKKAAKLSIAVTTTFYLLCGCMGYAAFGDDAPGNLLAGFGVSKVYWIIDIANAAIVIHLFGAYQVYAQPLFAFVEKEAAKKWPKIDKEFKVKIPGLPVYNQNIFMLVWRTVFVIFTTLIAMLIPFFNDILGVIGALGFWPLSVYFPVEMYIVQKRIPKWSRKWIVLEMMSSFCLLVSIVAGLGSSIGVWIDLQKYKPFSLEN 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02533 487 PANTHER OS05G0424000 PROTEIN-RELATED 5 481 - -
Car05g02533 487 Pfam Transmembrane amino acid transporter protein 45 473 IPR013057 -
Car05g02533 487 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 5 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02533 Car-Chr5 70417011 70422916 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02533 25 483 Organic Solute Cotransporters AT5G09220 64.795 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02533 K24917 - gmx:100817699 775.393