Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02531 atGGATGATGACATTTCCGAAACCAACCCAAACTATATCATAGATGGTATCTCTAATTCACAACCTAATTCCGAATACGACGATGATGGACGTCCTAAACGAACTGGAACCGTTTGGACTACAAGCTCTCATATAATAACAGCAGTGATTGGATCTGGGGTATTATCCTTAGCATGGGCCATTGCACAATTGGGTTGGATTGCTGGCCCTGTAGTCATGATCCTTTTCAGCTTCATCACTTTGTGCACTTCATCTATGCTATCTCAGTGTTATCGTTGTGGTGATCCTTTCTTTGGAAAGAGAAATTATACTTTTGTAGATGCAGTTGGCAACATTCTTGGCGGGTACAATACGACGGTTTGTGGAATAATTCAATACATATATCTTTATGGAAGTGCTATAGGATACACAATTGCAGCTCCTATTAGCATAATGGCAATAATAAGGTCTAGTTGTCTCCATTCGTCAGGAGGAAAAGGCACATGTCACGTCTCAAGCAACCCATACATGATCGGTTTTGGAGTCATTGAAATTTTCTTTTCTCAAATTCCAGATTTTCATGAAACATGGTGGCTCTCTGTAATTGCAGCAGTCATGTCTTTCGCATATTCATTAATTGGTGTATTTCTCGCTATTTCCCAAGTTGCAAAAAACGGTACCTTCAAAGGTACTATCAAAGGAGGAAGCATTGGAGTTGTGTCAACAACAAAAAAAGTATGGGGAATTTTCCAAGCTCTTGGTGACATAGCATTTGCTTATTCATACGCACAAATTCTGATTGAAGTTCAGGATACTATAAAAAATCCACCATCAGAAGTAAAAACAATGAAGAAGGCAACAATATTAAGTGTAGCTGTGACGACAACATTTTACATGCTCTGTGGTTGTATGGGCTATGCTGCATTTGGAGGAGAAGCACCAGGGAACTTGCTCACAGGATTTGATTTATACAATCCAGCTTGGCTCATCGATGTTGCGAATGCCGCGGTCGTTATTCACCTTGTTGGAGCATATCAAGTTTATGTTCAACCTGTTTTTGCATTCATTGAGAAAAATGCAACAACAAAATGGCCCCAAACAAATGTGGATCACAAAATTCCTATTCCTGGTTTTGGTCCTTACAATCTAAATCTATTTAGATTAGTTTGGAGAACAGTATTTGTTATCATAACCACTTTTATTGCAATGTTGATTCCTTTCTTCAATGATGTTTTGGGATTACTTGGAGCAGTGGGGTTTTGGCCTTTAACAGTTTATTTTCCAGTGGAGATGTATATCTTGCAGAAGCATATCTCAAAATGGAGTTTTAAATGGGTTTGTCTAAAACTCATGAGTTTTTTATGCTTTTTAGTATCAGCTATTGCTGCTATTGGCTCAATCGCCAGTATAGTGAATGACTTAAAGAAATACAAACCATTCAGCTCAGAATATTGA 1434 0.3815 MDDDISETNPNYIIDGISNSQPNSEYDDDGRPKRTGTVWTTSSHIITAVIGSGVLSLAWAIAQLGWIAGPVVMILFSFITLCTSSMLSQCYRCGDPFFGKRNYTFVDAVGNILGGYNTTVCGIIQYIYLYGSAIGYTIAAPISIMAIIRSSCLHSSGGKGTCHVSSNPYMIGFGVIEIFFSQIPDFHETWWLSVIAAVMSFAYSLIGVFLAISQVAKNGTFKGTIKGGSIGVVSTTKKVWGIFQALGDIAFAYSYAQILIEVQDTIKNPPSEVKTMKKATILSVAVTTTFYMLCGCMGYAAFGGEAPGNLLTGFDLYNPAWLIDVANAAVVIHLVGAYQVYVQPVFAFIEKNATTKWPQTNVDHKIPIPGFGPYNLNLFRLVWRTVFVIITTFIAMLIPFFNDVLGLLGAVGFWPLTVYFPVEMYILQKHISKWSFKWVCLKLMSFLCFLVSAIAAIGSIASIVNDLKKYKPFSSEY 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02531 477 PANTHER OS05G0424000 PROTEIN-RELATED 11 471 - -
Car05g02531 477 MobiDBLite consensus disorder prediction 1 33 - -
Car05g02531 477 Pfam Transmembrane amino acid transporter protein 34 463 IPR013057 -
Car05g02531 477 MobiDBLite consensus disorder prediction 11 25 - -
Car05g02531 477 Gene3D Amino acid/polyamine transporter I 219 467 - -
Car05g02531 477 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 11 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02531 Car-Chr5 70397780 70400432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02531 24 477 Organic Solute Cotransporters AT1G77380 68.341 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02531 K24917 - gmx:100816507 697.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02531 05 70397780 70400432 Car05g02531 05 70397780 70400432 ECH
Car04g02918 04 56308029 56313729 Car05g02531 05 70397780 70400432 PCT