Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02530 ATGAACGATTTCGACGGTTTATTAGGCACTGAATTCGGCTTAAAACCACAGGGCAAATCTGCACCAATGTCATCCAAAGGATCTTCCAATTTCACAAAAACTTCCTCCCTCAACTTCGAATCACCTTCCCGATCCTCTCCTTCTTCTAATCAAGATTCCGCTCCCTTCTCCGATCTCTTCAATTTAGATTCTGCTTCAAAATCCGTTAACTCGCCTGTTTACGATAAACCTGTTTACGACGACGACATTTTCGACGGCGTCAAGACTTCCTCCAAGGTATCACACCACGATGGAAGCGCCGCCGCGTTTGATGATCTTCTCGGCGGATTCGGTCGTTCCAAGAAATCGGAGAAGAAGAACGAGAAAACCGTTGCTGATTTTGATGATTTGATCCCTGGATTTGGGAACAGTAAGTCCTCTCGTCAAAGGCCCACTCCTGATATTGGTTCATCATCAGAATCTACTTTCAGTGCATCTAAAACAACCTCCAATGCAACAGAAGACCCTTTCAAAATATTTGAATCAGCTTCATCTCCAACTGTTTCATCATCCTCAGGCCACTTTGCAGACCCATTGGGAGAAATTAATAAATTTACTAGTTCTAGAAGCACAAAAAATAATAGTTCATCACATTCTAATGGTGGAGTATACGATGATACTGATCCTTTTGATGGACTTGGAAATTCAGCACCATCATTTTCATCAGAGAGGAATAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGGTACCAATTCCCCAACACCGAGGTCAAACACAAGTTCAAGTTGGACTAGAGATAAAGAATCAATTGAAAAATCATCTACGAGGAGTCCTGATAGACAGACACAAAACAAGATTCCTGTTGAACATGATCAGGAGTTTCATCAAACTCCATATAGCATGCCTACATATTCATCTGATTCTAATAGACCGGTAGTTGGCCGAAGGCCTACCTCCCCTTCAAATTTTAATGATGGTTTCAGACAGGTCAATGCTCGGGCAGATATGGCGCCAAAATATGAAGAAAAGTTTGTCTCAAATGGTGATATATGGCTGACGGTATCGGAGGTTCCTCTTTTTACACAACCAACTACTGCTCCACCACCTTCAAGACCACCTCCTCCCCGACCAGTTCATATCCCCAAGTCAGGAACAGGTTCACCAGCTTTTGCCAATGTCAGGAAGAAGGACAATGAATTTTCTTCTTCTTTCCCAAGTTCCGGTCAATTTTCTCAGGGTCCTAAATCTGCTCCAGCTGCAGCCAAGTTATCTTCCTCGTCACAGTTTGACGAACTTGAAAACTTTGCCATGGGCAGGAGCCGTGGTCATGATGGTGAACGTGAAAATGGTGTTCCCGATGAAGAATTAGAGATGAACTCAGCTTCTGCAGCTATGAAGGAAGCTATGGAGAGAGCTGAAGCTAAATTTAGGCATACCATGAGCGGCAGCAAAAGGAGATGGAGGAAATGGAGCAAAGAAGAATTGAGAGGGAAAGGGAGAAGAAAGAAAGGGAAAAAGCGTGAAAGAGCAGCTGCTGAAGCTCGTCAAAGAGCTGAGAAGGCTGCTGTTGACAAAGCTAATGCAGAAGCTAGAGTGCGTGCTGAAAGGGCTGCTGTTCAGAGGGCACAAGCTGAAGCCCGTGAAAGGGCTGCTGCTGAGGCAAAGGTAAGGGCTGAAAAGGCTGCTGCAGGGGCAAAGGAGAGAGAAGCAGGAGAACGAACTGCAGCGGCAAGGGCTGAAGCTGAAGTAAGAGTTAAAGCAGAACGTGCTGCTGTTGAAAGAGCTGCTGCGGAGGCTCGAGAAAGAGCTGCAGCTGCTGCAAGGATGTACCAGCAAAAAAATGAAAATGATCTTGAATCATTCTTCAGCATGGGTGGACGAGCTAACAGTGCTCCAAGGCCTCCTAGGTCTAGCTCTTCTGATTCTGTTTTTGATGCCCAATTTCAACCAAATGTAACCCGGAAATCTACAAGCGTGTCTTCAAACATAAAGAAGGCATCATCATCAACTAATATTGTGGATGATCTTTCCTCAATTTTCAGAGCTTCTCCCTCAGCTGGAGATTTTCTGGAAGTTGAAGGGGAAAGTGAAGAAAGACGAAAAGCCAGGTTGGAACGCCACCAGAGGGCTCAGGAGCGTGCTGCAAAAGCATTGGCTGAGAAGAATCAACGTGACCTACAGATTCAAAGAGAGCAGTCTGAGAGACATAGGCTTGCGGAAACACTGGATTTTGAAGTTAAGCGCTGGGCTGCAGGCAAAGAGGGGAATTTGCGTGCTTTACTCTCCAACTTACAATATGTGTTATGGCCTGAATGTGGTTGGCAGCCAGTTTCTTTGACTGATCTTATTACAGCCGCTGCTGTTAAAAAGGCTTATAGGAAAGCTACATTGTGCATTCATCCTGATAAAGTGCAGCAGAAGGGTGCCACTCTTCAACAGAAATATATTGCAGAGAAGGTGTTTGATCTATTAAAGGAAGCATGGAATAAGTTAAACTCAGAGGAGCTTTTTTAA 2571 0.4317 MNDFDGLLGTEFGLKPQGKSAPMSSKGSSNFTKTSSLNFESPSRSSPSSNQDSAPFSDLFNLDSASKSVNSPVYDKPVYDDDIFDGVKTSSKVSHHDGSAAAFDDLLGGFGRSKKSEKKNEKTVADFDDLIPGFGNSKSSRQRPTPDIGSSSESTFSASKTTSNATEDPFKIFESASSPTVSSSSGHFADPLGEINKFTSSRSTKNNSSSHSNGGVYDDTDPFDGLGNSAPSFSSERNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTNSPTPRSNTSSSWTRDKESIEKSSTRSPDRQTQNKIPVEHDQEFHQTPYSMPTYSSDSNRPVVGRRPTSPSNFNDGFRQVNARADMAPKYEEKFVSNGDIWLTVSEVPLFTQPTTAPPPSRPPPPRPVHIPKSGTGSPAFANVRKKDNEFSSSFPSSGQFSQGPKSAPAAAKLSSSSQFDELENFAMGRSRGHDGERENGVPDEELEMNSASAAMKEAMERAEAKFRHTMSGSKRRWRKWSKEELRGKGRRKKGKKRERAAAEARQRAEKAAVDKANAEARVRAERAAVQRAQAEARERAAAEAKVRAEKAAAGAKEREAGERTAAARAEAEVRVKAERAAVERAAAEARERAAAAARMYQQKNENDLESFFSMGGRANSAPRPPRSSSSDSVFDAQFQPNVTRKSTSVSSNIKKASSSTNIVDDLSSIFRASPSAGDFLEVEGESEERRKARLERHQRAQERAAKALAEKNQRDLQIQREQSERHRLAETLDFEVKRWAAGKEGNLRALLSNLQYVLWPECGWQPVSLTDLITAAAVKKAYRKATLCIHPDKVQQKGATLQQKYIAEKVFDLLKEAWNKLNSEELF 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02530 856 Coils Coil 597 635 - -
Car05g02530 856 CDD DnaJ 803 850 IPR001623 -
Car05g02530 856 MobiDBLite consensus disorder prediction 315 347 - -
Car05g02530 856 MobiDBLite consensus disorder prediction 196 216 - -
Car05g02530 856 MobiDBLite consensus disorder prediction 379 544 - -
Car05g02530 856 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 91 510 - -
Car05g02530 856 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 509 855 - -
Car05g02530 856 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 1 90 - -
Car05g02530 856 MobiDBLite consensus disorder prediction 622 666 - -
Car05g02530 856 SUPERFAMILY Chaperone J-domain 684 854 IPR036869 -
Car05g02530 856 Coils Coil 720 743 - -
Car05g02530 856 MobiDBLite consensus disorder prediction 381 400 - -
Car05g02530 856 MobiDBLite consensus disorder prediction 651 666 - -
Car05g02530 856 MobiDBLite consensus disorder prediction 110 126 - -
Car05g02530 856 MobiDBLite consensus disorder prediction 135 189 - -
Car05g02530 856 MobiDBLite consensus disorder prediction 1 76 - -
Car05g02530 856 MobiDBLite consensus disorder prediction 487 513 - -
Car05g02530 856 Coils Coil 528 566 - -
Car05g02530 856 MobiDBLite consensus disorder prediction 269 283 - -
Car05g02530 856 Gene3D DnaJ domain 725 855 IPR036869 -
Car05g02530 856 MobiDBLite consensus disorder prediction 101 349 - -
Car05g02530 856 MobiDBLite consensus disorder prediction 415 452 - -
Car05g02530 856 MobiDBLite consensus disorder prediction 21 71 - -
Car05g02530 856 MobiDBLite consensus disorder prediction 455 473 - -
Car05g02530 856 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 91 510 - -
Car05g02530 856 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 509 855 - -
Car05g02530 856 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 1 90 - -
Car05g02530 856 MobiDBLite consensus disorder prediction 528 544 - -
Car05g02530 856 ProSiteProfiles dnaJ domain profile. 791 855 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02530 Car-Chr5 70386682 70393113 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02530 - - cam:101505458 808.135