Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02517 ATGCAAATGGCTCCCATAATGAACTCAAACACTTCAACACTTGTACTCTACCCTGCATCACAAACAGAGGAACCAAAAGAAGAAAACATGGTTTCAATTTTTGACTCAAATTTGCTTAAAAAACAATTGAACATACCAAAAGAGTTCATTTGGCCATCTATGGACTTAGTTAACACCACTCAAGAAGAGCTAAAAGAACCTCTCATAGACTTAAGTATAATGAAAAGTGGTGATGAAGAAGCTATTTCAAGTGCTGCTGAGCTTGTGAGAAAAGCATGTTTCAAACATGGTTTTTTTCAAGTGATTAATCATGGTGTGGACCAAGATCTTATTCATGATGCTTATTGTGAAATGGATTCCATTTTCAAACTACCAATCAATAAGAAGCTAAGTGCTAAGAGGGAACATGGTCGAGTTTCAGGTTATTCAGGTGCTCATGCAGATAGATATTCGACCAAGTTACCATGGAAAGAGACATTTTCTTTTTTATACAATCATCAAAACAATTCCAATTCCCAGATTGTTAATTACTTCCAATCTATCTTAGGAGAAGATTTTCAACACACAGGATTGGTGTATGAAAAGTACTGTAAAGCAATGAAGGAATTATCTCTAGTAATTATGGAGCTATTGGCCATTAGTTTGGGAGTGGATCGTTTGTATTATAGAAGATATTTTGAAGATGGTGAGTCAATAATGAGGTGCAACTATTATCCACCATGTAAAAATTCAAGTGTCACACTTGGTACTGGACCTCACTCAGACCCAACATCACTAACTATTCTTCATCAAGACCAAGTTGGAGGTCTAGAAGTTTTTGCTGATAACAAATGGGTGGCTGTTCGCCCTAGACATGAAGCCTTAGTCATAAATATAGGTGACACTTTCATGGCATTATCAAATGGGAGATTCAAGAGTTGTTTGCACAGAGCATTGGTGAACAAATACAGAGAAAGAAGGTCATTGGTATTCTTTGTGTGTCCAAGAGAAGACAAAGTGGTGAAACCTCATGAAAATTTGTTAAGAAAAAATGAGGAAAGAAAGTACCCTGATTTCACATGGTCTACTTTGCTTGAATTCACACAGAATCATTACAGGGCTGATGTTGCTACCCTCCAAAACTTCTTTCATTCACATCATTCATCTCCCAATTTATCCAACATATAG 1167 0.3642 MQMAPIMNSNTSTLVLYPASQTEEPKEENMVSIFDSNLLKKQLNIPKEFIWPSMDLVNTTQEELKEPLIDLSIMKSGDEEAISSAAELVRKACFKHGFFQVINHGVDQDLIHDAYCEMDSIFKLPINKKLSAKREHGRVSGYSGAHADRYSTKLPWKETFSFLYNHQNNSNSQIVNYFQSILGEDFQHTGLVYEKYCKAMKELSLVIMELLAISLGVDRLYYRRYFEDGESIMRCNYYPPCKNSSVTLGTGPHSDPTSLTILHQDQVGGLEVFADNKWVAVRPRHEALVINIGDTFMALSNGRFKSCLHRALVNKYRERRSLVFFVCPREDKVVKPHENLLRKNEERKYPDFTWSTLLEFTQNHYRADVATLQNFFHSHHSSPNLSNI 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02517 388 Pfam non-haem dioxygenase in morphine synthesis N-terminal 67 170 IPR026992 -
Car05g02517 388 SUPERFAMILY Clavaminate synthase-like 39 367 - -
Car05g02517 388 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 23 379 - -
Car05g02517 388 PANTHER GIBBERELLIN 20 OXIDASE 1-B-LIKE 23 379 - -
Car05g02517 388 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 228 328 IPR005123 -
Car05g02517 388 PRINTS Isopenicillin N synthase signature 89 106 - -
Car05g02517 388 PRINTS Isopenicillin N synthase signature 253 274 - -
Car05g02517 388 PRINTS Isopenicillin N synthase signature 288 314 - -
Car05g02517 388 Pfam 2OG-Fe(II) oxygenase superfamily 230 328 IPR044861 -
Car05g02517 388 Gene3D - 35 366 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02517 Car-Chr5 70247808 70249840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02517 41 366 Glycosyltransferase AT5G59530 28.319 2.00e-29 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02517 K05282 - gmx:100816834 600.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02517 05 70247808 70249840 Car05g02517 05 70247808 70249840 ECH