Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02488 ATGAAGGAATCCACAGTTGTAATTGTAGGTGGTGGTCCATCTGGCCTAGCAATTTCAGCTTGCTTAACAAAAAACTTAATTTCTCATATCATACTTGAAAAAGAAGATTGCTATGCTTCTCTTTGGAGAAAAAATGCTTATGATCGTTTAAATCTTCATTTAGCTAGTGAGTTTTGCTCTTTGCCCCTCATGCCACACCCCCCTTCAGGCCCAACATACCTATCCAAAGACCAATTCCTTCAATACATAGATAACTATGTCCAACATTTCAACATAAACCCTCGTTATTGTCGTGTAGTTAAGTCAGCTATGTATGATAAAGTTAGAAGCAAATGGAGTGTTGAAGCAAATAACACCAAAGAAGGCATATTTGAAGTTTATGAGGCTAAATTTCTTGTAATTGCCACGGGCGAAAATAGTGAAGGGTATATTCCTAATGTGCATGGACTAGACACGTTTGAAGGAGATATTTTACACTCCAAATACTACAAGTCCGGTTCAAAATATGAATCAAAAGAGGTTTTGGTAGTTGGATGTGGAAACTCGGGTATGGAGATTGCTTTTGACCTTCATAATTGGGGTGCTAAACCTTCTATTGTTATTCGTAGTCCGCTTCATGTGTTTACAAAGGAATTGATTCGTCAAGGTATGCATATGGTGAAGTATTTGCCGGTTCATACTGTAGATACAATCCTTATTCTTTTGGCAAAACTAAAATATGGTGATCTGTCCAAGCATGGGATTTATCGTCCCAAAGTAGGTCCTTTACATCTCAAGAACATTACTGGAAAGTCCGCAGTTATTGATGTTGGAACCATTCAAAAGATTAAAGAAGGAGCTATTAAGGTTGTTGCTTCGGGTATAAAGAGAATTGAGAAGAAGAAGGTTGTGTTTGCAGACAACACGGAAAAAGAGTTTGATGCAATTGTTTTTGCTACTGGCTACAAAAGTGTGGCTAATGAATGGCTTAAGGTTTATCAGCATCGCAATGTGAAAAAGAAAGAAGCGATGCATAGATTAGTAGAGATGGCTAGATTTCATACCCGAAAACTATCTCTCAGTCTCATCACTTTCTACACCATTTTCATTTTTGCTTTCTCCATCTTCATTTTCTTGCTCTACGTAAGAACCTTCATCGCCGATGAAGATCAACCGCATCCGTTACTTTCTCATCAATCTCGATCTCTCCAGGTGCCGGATTCACCTAGGTACAAATACGACGAGCAACTTTGGGATTCTCCTCACAGCCGTGGCTTCCACCCTTGTGTCAAGCCAACTGCTAAATATAAAGGTGCCCAAGGATTTGAACGCTATCTGTCCGTTAGAAGTAACGGTGGGCTAAATCAAATGCGAACTGGTATAGCAGACATGGTGGCTGTGGCACATATAATGAATGCAACTTTAGTCATTCCTCAATTGGATAAACGTTCATTCTGGCAAGACTCAAGTGTATTTTCAGACATATTCGATGAGTTTCATTTCATTGAATCCCTGAAAGGAGATATCAGGATTGTTCAGGAACTTCCCAAGAACTTGGAAGCTGCCCCCCGGGCTAGAAAACACTTTACTTCCTGGTCTGGAGTTGGTTACTATGAAGAGATGGCAAGGTTATGGAAAGACTATCAGGTGATACATGTTCCAAAATCAGATTCTCGACTTGCAAACAATGATCTTCCTCTAGACATCCAGAGATTGAGATGCCGCGCAATGTATCATGCACTACAATTTTCTCCTCCTATTGAAAATCTCGGAAAGAGGTTGGTGGATCGGCTGAGATCACGCGGGGGAAAGTATATTGCTCTCCATCTAAGATATGAGAAAGATATGTTGTCTTTTACTGGATGTGCATATGGTCTGACAGATGTGGAATCTGAAGAGCTGAGAATTTTAAGGGAGACTACAAATTATTGGAAAGTAAAAAAAATAAACTCAACAGAACAGAGAATTGGAGGATTTTGTCCGCTGACTCCAAAGGAGGTTGGCATTTTTCTTCAAGCTCTTGGGTTTCCCCCATCAACACCAATATACATTGCTGCAGGGGAGATCTATGGTGGCAATACTCATCTGTCAGAGCTCTCCTCCCGCTTCCCTAATCTAATCTTTAAGGAATCCCTTGCAACTCCTGAAGAGCTGAAAGCTTTCACCAATCATGCATCTCAAAATGCTGCACTCGATTACATAATCTCTGTAGAGAGTGATGTATTTGTTCCATCGTATTCAGGAAATATGGCACGAGCTGTTGAGGGACACCGTAGGTTCTTAGGTCACCGCAAGACAATCAACCCAGACAGGAAAGGACTTATTGGAATCTTTGATAAGCTGGAAACTGGAGAGCTAGTAGAAGGAGCCGCACTGTCACATATTGTGCAGCGGATGCACAAGAACAGGCAAGGAGCTCCAAGGAAAAGACAAGGTTCATTACCGGGAGTTAAAGGCCGAGCACGATTCAGGACTGAAGAGTCCTTTTATGAAAATCCATACCCCGAGTGCATATGTGGTTCAAGAAGCAAACTAGAAAGAACATGA 2526 0.4093 MKESTVVIVGGGPSGLAISACLTKNLISHIILEKEDCYASLWRKNAYDRLNLHLASEFCSLPLMPHPPSGPTYLSKDQFLQYIDNYVQHFNINPRYCRVVKSAMYDKVRSKWSVEANNTKEGIFEVYEAKFLVIATGENSEGYIPNVHGLDTFEGDILHSKYYKSGSKYESKEVLVVGCGNSGMEIAFDLHNWGAKPSIVIRSPLHVFTKELIRQGMHMVKYLPVHTVDTILILLAKLKYGDLSKHGIYRPKVGPLHLKNITGKSAVIDVGTIQKIKEGAIKVVASGIKRIEKKKVVFADNTEKEFDAIVFATGYKSVANEWLKVYQHRNVKKKEAMHRLVEMARFHTRKLSLSLITFYTIFIFAFSIFIFLLYVRTFIADEDQPHPLLSHQSRSLQVPDSPRYKYDEQLWDSPHSRGFHPCVKPTAKYKGAQGFERYLSVRSNGGLNQMRTGIADMVAVAHIMNATLVIPQLDKRSFWQDSSVFSDIFDEFHFIESLKGDIRIVQELPKNLEAAPRARKHFTSWSGVGYYEEMARLWKDYQVIHVPKSDSRLANNDLPLDIQRLRCRAMYHALQFSPPIENLGKRLVDRLRSRGGKYIALHLRYEKDMLSFTGCAYGLTDVESEELRILRETTNYWKVKKINSTEQRIGGFCPLTPKEVGIFLQALGFPPSTPIYIAAGEIYGGNTHLSELSSRFPNLIFKESLATPEELKAFTNHASQNAALDYIISVESDVFVPSYSGNMARAVEGHRRFLGHRKTINPDRKGLIGIFDKLETGELVEGAALSHIVQRMHKNRQGAPRKRQGSLPGVKGRARFRTEESFYENPYPECICGSRSKLERT 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02488 841 PRINTS Pyridine nucleotide disulphide reductase class-II signature 169 193 - -
Car05g02488 841 PRINTS Pyridine nucleotide disulphide reductase class-II signature 5 27 - -
Car05g02488 841 MobiDBLite consensus disorder prediction 793 812 - -
Car05g02488 841 SUPERFAMILY FAD/NAD(P)-binding domain 5 207 IPR036188 -
Car05g02488 841 PANTHER O-FUCOSYLTRANSFERASE 38 337 836 - -
Car05g02488 841 Gene3D - 1 356 IPR036188 -
Car05g02488 841 PRINTS FAD-dependent pyridine nucleotide reductase signature 173 191 - -
Car05g02488 841 PRINTS FAD-dependent pyridine nucleotide reductase signature 6 25 - -
Car05g02488 841 Pfam GDP-fucose protein O-fucosyltransferase 438 753 IPR019378 -
Car05g02488 841 CDD O-FucT_plant 438 759 IPR024709 -
Car05g02488 841 Pfam Pyridine nucleotide-disulphide oxidoreductase 7 203 - -
Car05g02488 841 SUPERFAMILY FAD/NAD(P)-binding domain 173 318 IPR036188 -
Car05g02488 841 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Car05g02488 841 PANTHER OS02G0726500 PROTEIN-RELATED 337 836 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02488 Car-Chr5 69999245 70012700 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02488 408 832 Miscellaneous Gene Families AT1G22460 58.920 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02488 - - mtr:MTR_3g096020 998.423