Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02485 ATGATGACTTGTAAGATCTTCTTCTCACTATTTCTCCTCCTCTTCCTATCACACCCTAATCTATGCACATTTGTGAATGGAGATGCCACTTTAATCAAAAACACATGCAAGAACACAAAGTACTACAATCTATGTTTCTCTTCTCTCAAATCTGATCCTAGCAGTCCAAATGCAGATACAAAGGGACTAGCTCTGATCATGGTTGGGATTGGAATGACAAATGCAACTTCAACTTCTTCATATTTGTCTTCGAAGTTGCTTACTCCTACAAACAACACTACCTTAAAAAGGGTCCTCAAAGAGTGTGAAGATAAGTATAATTATGCTGGTGATGCACTCCAAGCTTCAGTGCAGGATTTGGCTAATGAAGAATATGATTATGCTTATATGCACATAACTGCAGCCAAAGATTACCCAAATGCTTGTCACAATGCATTTAAAAGGGTTAATGATTTAGTTTATCCTACTGAGCTTGCTAATAGAGAAAATGGTTTGAAACATATTTGTGATGTGGCTATGGGGATCATTGATAATCTAATTAACTGGTAG 549 0.3679 MMTCKIFFSLFLLLFLSHPNLCTFVNGDATLIKNTCKNTKYYNLCFSSLKSDPSSPNADTKGLALIMVGIGMTNATSTSSYLSSKLLTPTNNTTLKRVLKECEDKYNYAGDALQASVQDLANEEYDYAYMHITAAKDYPNACHNAFKRVNDLVYPTELANRENGLKHICDVAMGIIDNLINW 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02485 182 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 180 IPR035513 -
Car05g02485 182 PANTHER CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 2 11 179 - -
Car05g02485 182 CDD PMEI_like 36 178 - -
Car05g02485 182 Pfam Plant invertase/pectin methylesterase inhibitor 31 174 IPR006501 GO:0004857
Car05g02485 182 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 179 - -
Car05g02485 182 SMART PMEI_2 27 175 IPR006501 GO:0004857
Car05g02485 182 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 29 179 IPR035513 -
Car05g02485 182 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 179 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02485 Car-Chr5 69977848 69978863 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02485 - - gmx:100306461 274.248